PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004488105.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 199aa    MW: 22043.5 Da    PI: 4.6805
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004488105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-171666155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+G+r +k +g+Wv+eIr p++   r+r++lg++++a +Aa+a +aa+ +l+g
  XP_004488105.1 16 SLYRGIRKRK-WGKWVSEIRLPNS---RQRIWLGSYDSAVKAARAFDAAMFCLRG 66
                    57*****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.53E-281676No hitNo description
SuperFamilySSF541712.62E-191675IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-281775IPR001471AP2/ERF domain
SMARTSM003801.4E-301780IPR001471AP2/ERF domain
PfamPF008473.9E-101766IPR001471AP2/ERF domain
PROSITE profilePS5103220.9031774IPR001471AP2/ERF domain
PRINTSPR003675.9E-91829IPR001471AP2/ERF domain
PRINTSPR003675.9E-94056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MVKSNMEKTA AERSDSLYRG IRKRKWGKWV SEIRLPNSRQ RIWLGSYDSA VKAARAFDAA  60
MFCLRGSGAK FNFPDDPPDI AGGRSMTPSQ IQAAAARFAN SGRPVNTPIE TPSSSVGTVL  120
WPMESQSPAL SDATVQMDCD ITENWLSVNG SGNYVPDYSI FPGFDDFGGD FFGPELPNYD  180
YGDENINGLI FHDSFLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1418761574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004488105.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004488105.11e-146ethylene-responsive transcription factor ERF017-like
SwissprotQ84QC21e-52ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLA0A1S2XHF81e-145A0A1S2XHF8_CICAR; ethylene-responsive transcription factor ERF017-like
STRINGXP_004488105.11e-146(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.18e-47ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Li SJ, et al.
    The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4.
    Sci Rep, 2016. 6: p. 20151
    [PMID:26837571]
  3. Yin XR, et al.
    Involvement of an ethylene response factor in chlorophyll degradation during citrus fruit degreening.
    Plant J., 2016. 86(5): p. 403-12
    [PMID:27037684]