PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487568.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 401aa    MW: 45487.6 Da    PI: 7.7073
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.11.5e-31102155255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  XP_004487568.1 102 PRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 155
                     8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-2998156IPR009057Homeodomain-like
PROSITE profilePS5129412.56298158IPR017930Myb domain
SuperFamilySSF466892.51E-14100156IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-22102157IPR006447Myb domain, plants
PfamPF002496.2E-9103154IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MAERICICDE DKSEGSSSID AKPSSASRRK CSFFDLNEEV VDDGDDNEMI LISDSHCGEI  60
ISNNDISSQE ENLSSNNNNN NCSEEGKGRG STVRQYVRSK MPRLRWTPDL HLAFVHAVER  120
LGGQERATPK LVLQLMNVRG LSIAHVKSHL QMYRSKKLDA SGQVLSQKRT IQGRHHHILD  180
MYGRFNVEGQ FGVDNNYLNP SSPLMKQPYN EIKDHGASRF HQSGLFNNHM ILRSSSGWDK  240
DFYKTSSHLF DVKDAITRNN GSQVRQLLPQ GSENQEFISL SKDGHNAQHF PWSTYSNSIN  300
KQHYQPTSCS PVFKMFGAEV HDKKDKMQEF IHQTQVSKQS DVKAQLKRLN DKKQLPSFLE  360
LKLSQNSENV KEKTNVDPES EQETNTMLSL SLFSSSSSNS K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-19103157357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-19103157357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-19103157357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-19103157357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-19103157458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004487568.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487568.10.0putative two-component response regulator ARR21
TrEMBLA0A1S2XDB70.0A0A1S2XDB7_CICAR; putative two-component response regulator ARR21
STRINGXP_004487568.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-36G2-like family protein