PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004486724.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | Trihelix | ||||||||
Protein Properties | Length: 470aa MW: 54327.6 Da PI: 4.5885 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 34.9 | 4e-11 | 181 | 265 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+l L+++ + +r++l+ W++v+ ++e +e++ +qC+++ + l+k+ykk k ++ s + +c+yf++++ XP_004486724.1 181 WTDEETLILLDVWGNQFILNERKSLRFEEWKQVAGTVSELsNVEKTVTQCRNRVDTLKKKYKKDKIKFEETGSLDG-KCVYFKKMD 265 *************************************876167********************9988887767777.8*******8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.9E-18 | 179 | 267 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence Send to blast |
MDEDFENDPI EYDISYPHPK GYANLKRPLR NSPFSQSLAN QSAKDFNDDD DMEEDDGDED 60 DDNENTQKSN AMKIDDELQW IPIRKKLKRL MASFKFADPN HPVNDDEVEE WFERRNEGFD 120 DNDYKPKSHD METEKELEWQ SEKNKLKSWI STYEFAAQEP TQSTSAPKLS FGVRSSFIDH 180 WTDEETLILL DVWGNQFILN ERKSLRFEEW KQVAGTVSEL SNVEKTVTQC RNRVDTLKKK 240 YKKDKIKFEE TGSLDGKCVY FKKMDRLMST VSTPPQQANQ LDDMKNSPPN TEAISVEGLE 300 GSRGKKISEV KGCTDEPSSF KLLADFILKL GVIYEKMENE KWQQIVELEK LRMNFLNDME 360 TRRRQNFQRL INEILKLVQM DGKNEDSAKN LEGLQSEILK LVQMDGKNED SAKNLEGLQS 420 EILKLVQMDG KNEDSAKNLE GLQSEILKLV QMDHKNEGSA KHDGSAKSGI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004486724.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004486724.1 | 0.0 | kinesin-related protein 4-like | ||||
TrEMBL | A0A1S2XEI6 | 0.0 | A0A1S2XEI6_CICAR; kinesin-related protein 4-like | ||||
STRING | XP_004486724.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2441 | 34 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 4e-27 | Trihelix family protein |