PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004486629.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 246aa    MW: 28403.8 Da    PI: 8.018
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004486629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.4e-125499555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    h ++Er+RR+++ +++  L +++P +     kK +Ka++L +A++Y+k+L+
  XP_004486629.1 54 HVMAERKRRHEMAERLVALSSIIPGL-----KKIDKASVLGEAINYVKQLK 99
                    899***********************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.2784998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-1453114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.82E-105499No hitNo description
SuperFamilySSF474592.88E-1554124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-95498IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.9E-1255104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MEDWWENWFS DLDMNGDNSS LKLNECEMNS CCNYKARATE GRKRVRSCWE IEDHVMAERK  60
RRHEMAERLV ALSSIIPGLK KIDKASVLGE AINYVKQLKG RIAILEQQSN NKSKRTKCTK  120
SIISFTQSQY HPPNHNHNLD SNQVLPQIEA ICIESEKEVL FIRIQCEKCK SILFTLLVIL  180
QNMHLSISSS SVLPFGKNTL NIAIIAKMGE EYKITGEELV KKLRQDLMEL YEMQHHVIHA  240
SVSKEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14161RKRVRSCWEIEDHVMAERKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004486629.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486629.10.0transcription factor bHLH18-like
TrEMBLA0A1S2XDL20.0A0A1S2XDL2_CICAR; transcription factor bHLH18-like
STRINGXP_004486629.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14964813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-32bHLH family protein