PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004486311.2

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

G2-like

Protein Properties

Length: 221aa MW: 24879.2 Da PI: 9.7202

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004486311.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	50	103	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+av++LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+ XP_004486311.2 50 PRLRWTPDLHRCFVHAVHRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRS 103 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.8E-33	46	105	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.461	46	106	IPR017930	Myb domain
SuperFamily	SSF46689	1.79E-16	48	104	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.5E-24	50	104	IPR006447	Myb domain, plants
Pfam	PF00249	4.5E-10	51	102	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence Send to blast
MSSSSSSLIS GVVDNNPSSH LTQLRTPSHL IQQMSLKPPM VRPYVRSKMP RLRWTPDLHR 60 CFVHAVHRLG GEDRATPKLV LQLMNVKGLT ISHVKSHLQM YRSMKHEQMN EAAARKNNMA 120 LLGSTESSSA VVPSCGTEDL ARTQTQRNGY EPESSYNNES IIIGDGHNQK MHTYIIFKGI 180 LRTDTVQANI REHQRGSLHE LLTRSEARED TNDVSLELTL T

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	3e-20	51	106	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-20	51	106	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-20	51	106	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-20	51	106	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	3e-20	51	106	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004486311.2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004486311.3	1e-164	probable transcription factor KAN2 isoform X1
TrEMBL	A0A1S2XAI1	1e-163	A0A1S2XAI1_CICAR; probable transcription factor KAN2 isoform X1
STRING	XP_004486311.1	1e-164	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9381	28	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	2e-36	G2-like family protein