PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004485926.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 313aa    MW: 34656.5 Da    PI: 6.3083
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004485926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-182272256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  XP_004485926.1 22 RFVGVRQRP-SGRWVAEIKD----SiQKIRLWLGTFDTAEDAARAYDTAARALRGA 72
                    689******.7*********....4345*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.3E-342285IPR001471AP2/ERF domain
PfamPF008473.3E-122271IPR001471AP2/ERF domain
PROSITE profilePS5103220.5472279IPR001471AP2/ERF domain
CDDcd000183.67E-312279No hitNo description
Gene3DG3DSA:3.30.730.101.8E-282279IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-202380IPR016177DNA-binding domain
PRINTSPR003671.3E-72334IPR001471AP2/ERF domain
PRINTSPR003671.3E-74561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MVRGVTDNGI RSRKKSSRGH HRFVGVRQRP SGRWVAEIKD SIQKIRLWLG TFDTAEDAAR  60
AYDTAARALR GANARTNFDL PQAATNGGGG AKRGASSTFK METTEPFSFE DVNESGSDSN  120
CFLGALKAKL FDGKEGRFFS FPFHNSVPVV QSNMVSNSSQ NFCAKNELTH ANNNTMPSLL  180
SVSSNTSSKS VVIPNHDHEV VDGVNNNQLC QTPSIMTNML WSNEMEYEFP WHTQNMMTHV  240
PDNSISTSFP WPGVIESNVE TNMVNMQLPI VGGANEGFWT LEQQQQFVQC ENNSWFGSSG  300
SWDPLIYVPS ELA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1420781271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004485926.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004485926.10.0ethylene-responsive transcription factor ERN2-like
TrEMBLA0A1S2X9Y30.0A0A1S2X9Y3_CICAR; ethylene-responsive transcription factor ERN2-like
STRINGXP_004485926.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-17related to AP2 11