PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004485800.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Dof
Protein Properties Length: 305aa    MW: 32135.2 Da    PI: 9.2833
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004485800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1208.7e-382382362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +  +kcprCds ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+++
  XP_004485800.1 23 QPPQKCPRCDSFNTKFCYYNNYSLSQPRYFCKSCRRYWTQGGTLRNVPVGGGCRKGKRAK 82
                    66789**************************************************99876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-261080IPR003851Zinc finger, Dof-type
PfamPF027011.0E-322580IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.8632680IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102864IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEQEGVDGRR GEMNKQVQIH PPQPPQKCPR CDSFNTKFCY YNNYSLSQPR YFCKSCRRYW  60
TQGGTLRNVP VGGGCRKGKR AKNSSSTSSG NSSLSQTPVL SSAQQQTMAL ALMTKDASFS  120
SALPFYQGGG GVGGVGYMSS FAGFNNNNQM NLPSSTHSNP FENVGGHSNL GLLQGFNVAA  180
AALGNSTQGQ NRPSQFFPMG MFTSEQQQGL NLIPPCSGSG SGVGVGALTH HENWTQSFMN  240
NNSGNNNRVN DPSLWSTIST TTSIGGANNS DRNLGGGSGG GASVGGSSSL APNQWPDLSG  300
FNPSQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004485800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004485800.10.0dof zinc finger protein DOF5.3-like
TrEMBLA0A1S2X9S50.0A0A1S2X9S5_CICAR; dof zinc finger protein DOF5.3-like
STRINGXP_004485800.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41453258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.11e-34TARGET OF MONOPTEROS 6