PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004485664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | GeBP | ||||||||
Protein Properties | Length: 393aa MW: 43421 Da PI: 5.1651 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 73.7 | 3.3e-23 | 182 | 267 | 1 | 95 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrl+seeDe+++L+ l df +kt+k+p +d af+ fvkks++++++++q+ +K+rrLKkKf++ sf+k+hd+k+fel kk+ XP_004485664.1 182 KLFQRLFSEEDELIILKNLADFISKTKKDPLKDHVAFHTFVKKSLHVDATSEQVKQKVRRLKKKFETSD---------SFTKPHDKKAFELYKKV 267 579**************************************************************8643.........68***********9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.6E-20 | 184 | 267 | IPR007592 | Protein of unknown function DUF573 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005730 | Cellular Component | nucleolus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence Send to blast |
MAPKKQRPSP IDEPPTASSS SSSSEEDDDQ QPSSHQPEDE VEKSASSEEE DDEEEGSSED 60 EDEEDQPQPP SQPASKNPPP STPSLKTKPS SSSEYETGSE SDPEPTPPPN PKVKPLASKP 120 MKAQPLAQAQ STPVPARSGT KRAAENGNDS KRSKKKTSAV TTGGDSDDEM EAEPTTGEDS 180 KKLFQRLFSE EDELIILKNL ADFISKTKKD PLKDHVAFHT FVKKSLHVDA TSEQVKQKVR 240 RLKKKFETSD SFTKPHDKKA FELYKKVRGN KPNKAEENGK NLKSPNKEAS AKNGNEGPAK 300 KELATKKEPE KVVENSSLPL TEMFRFDSGV GLSGLNENVA KKGLELIENS KRVDLEDKWK 360 ELQIVEMELF LERAQLIRDQ TSALVKVQKK SSN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004485664.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004485664.1 | 0.0 | probable transcription factor At1g61730 | ||||
TrEMBL | A0A1S2XC45 | 0.0 | A0A1S2XC45_CICAR; probable transcription factor At1g61730 | ||||
STRING | XP_004485664.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25210.1 | 1e-19 | DNA-binding storekeeper protein-related transcriptional regulator |