PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA12g19110
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 250aa    MW: 27310.7 Da    PI: 10.6982
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA12g19110genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY55.88.9e-18187245259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++pr         + + kk+ve++ +dp ++++tYe+eH+h+
  CA12g19110 187 EDECSWRKYGQKPIKGSPYPRLITSLPVFsNVQHKKHVEKAMDDPMMLIMTYEEEHRHT 245
                 79*******************987654435****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-19176246IPR003657WRKY domain
PROSITE profilePS5081118.808181244IPR003657WRKY domain
SuperFamilySSF1182901.57E-13183245IPR003657WRKY domain
SMARTSM007744.1E-13186246IPR003657WRKY domain
PfamPF031062.0E-14187244IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MVGRTGHARL RRAPVQAVQA QAQAKVQVHD SLTSPSLSPH GHMEKERVLA PAPLFVVAHV  60
VALVQTGLML GFRKPRFNVV VAVGASVGDM KWKDAFGSMK NGISSSFLSF ATGEGSRSIS  120
SVALPSSSML LRLMVQAIST GKQPSATGER CHEQEQSSDG SGKKRKVFPK KVIRTPVISS  180
KITDIPEDEC SWRKYGQKPI KGSPYPRLIT SLPVFSNVQH KKHVEKAMDD PMMLIMTYEE  240
EHRHTQVAM*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016549070.10.0PREDICTED: probable WRKY transcription factor 11
TrEMBLA0A1U8F0B30.0A0A1U8F0B3_CAPAN; probable WRKY transcription factor 11
TrEMBLA0A2G2YAN30.0A0A2G2YAN3_CAPAN; Putative WRKY transcription factor 7
STRINGSolyc12g096350.1.13e-48(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31452250
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.22e-37WRKY DNA-binding protein 11