PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA12g13900
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 271aa    MW: 30553 Da    PI: 5.0558
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA12g13900genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71e-1691140255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr++  + +Wv+e+r+pse   +kr++lg++ tae+Aa+a++ a+++l+g
  CA12g13900  91 IYRGVRRRN-NDKWVCEVREPSE---QKRIWLGSYLTAEMAARAHDVAALALRG 140
                 69****887.8*********976...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.17E-2890150No hitNo description
PfamPF008476.2E-1190140IPR001471AP2/ERF domain
SMARTSM003802.6E-2591154IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-1991150IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.3E-2891150IPR001471AP2/ERF domain
PROSITE profilePS5103220.91691148IPR001471AP2/ERF domain
PRINTSPR003672.0E-692103IPR001471AP2/ERF domain
PRINTSPR003672.0E-6114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MYKYTRHIRL LQQTTNYQQI QNSSIILSTP DSINQNSKAE ILLRPTTTMN NSSSCSSVRM  60
EASDEQSFLL ASSKPKKNAG RKKFKETRHP IYRGVRRRNN DKWVCEVREP SEQKRIWLGS  120
YLTAEMAARA HDVAALALRG QLATLNFADS AWLLQVPVSN DPKELRQAAA RAAEAFGPRG  180
NSNINVDVDI GDEEMKEVEP QDNVVDNYNV VVEENGSNVM YSSSCGIEEW QANMEQGCMF  240
SPNPCLYGSH FSWDEDVESD VEVSLWNYSL *
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016549804.10.0PREDICTED: dehydration-responsive element-binding protein 1C-like
TrEMBLA0A1U8F0X50.0A0A1U8F0X5_CAPAN; dehydration-responsive element-binding protein 1C-like
STRINGXP_009777001.11e-101(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.11e-41ERF family protein