PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA12g05910
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 270aa    MW: 31184.8 Da    PI: 4.6899
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA12g05910genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.46.7e-2431282128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 
                   G+rFhPtdeel+ +yLk+ v +  l+  ++ik +d+++ +ePw++    +++ek  yf s+ ++ +++ k+ +r++ +g+Wk + + +++ +   k+
  CA12g05910   3 SLGYRFHPTDEELI-NYLKNFVLHGVLPPRDFIKVADLFEdLEPWEIM---TGSEKTGYFLSRLKRFKNSTKKFSRTVGKGTWKGQNSGNPIEDGlkKN 97 
                 57************.9**********999999****998626*****5...4567888**********99**********************9877688 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g k++L + + ++++ ++ +W+m+ey l
  CA12g05910  98 TTIGYKRSLKYKSDNEKDENNDKWLMKEYFL 128
                 88**********9999999**********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-242150IPR003441NAC domain
PROSITE profilePS5100526.9422150IPR003441NAC domain
PfamPF023652.9E-175127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MLSLGYRFHP TDEELINYLK NFVLHGVLPP RDFIKVADLF EDLEPWEIMT GSEKTGYFLS  60
RLKRFKNSTK KFSRTVGKGT WKGQNSGNPI EDGLKKNTTI GYKRSLKYKS DNEKDENNDK  120
WLMKEYFLPD EYFRKSNKNY AFVICKIKEK KKNEKKNKGV VNDDVMEEEV DEFIDYVLES  180
IPDNHQVITN GDDNRFAVAN EVNYEVMRTN YEASTSTLHE DYGGEGRSNY LEGGGVEDFN  240
GINHLLLGVE DINDENCCID YDELLEIIG*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016549495.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A2G2Y6900.0A0A2G2Y690_CAPAN; Uncharacterized protein
STRINGXP_009604942.12e-62(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1523178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.17e-17NAC domain containing protein 94