PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA11g10600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | TCP | ||||||||
Protein Properties | Length: 95aa MW: 10782.1 Da PI: 10.6172 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 30.1 | 1.6e-09 | 55 | 77 | 2 | 24 |
TCP 2 agkkdrhskihTkvggRdRRvRl 24 a kkdrhski T+ g+RdRR+Rl CA11g10600 55 ASKKDRHSKINTAHGLRDRRMRL 77 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 2.5E-10 | 56 | 79 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 10.703 | 57 | 94 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence Send to blast |
MVEEDSNKLD KQEEEYHEEL VLKSSKNKKD EMSSTTTSTM RRKNNKYATG AGAGASKKDR 60 HSKINTAHGL RDRRMRLTQN SSQILQFARL SPVR* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016567552.1 | 3e-32 | PREDICTED: transcription factor CYCLOIDEA-like | ||||
TrEMBL | A0A2G2YFP2 | 3e-62 | A0A2G2YFP2_CAPAN; Uncharacterized protein | ||||
STRING | Solyc03g119770.2.1 | 7e-17 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2482 | 22 | 56 |