PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g04260
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 363aa    MW: 40759.8 Da    PI: 6.9264
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g04260genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.92.3e-332175155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprl+Wtp+LH+rFv+av+qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl
  CA11g04260 21 KPRLKWTPDLHQRFVDAVSQLGGPDKATPKSLMRVMNIHGLTLYHLKSHLQKYRL 75
                79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.2241878IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.9E-311978IPR009057Homeodomain-like
SuperFamilySSF466895.55E-162076IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-232176IPR006447Myb domain, plants
PfamPF002495.6E-82374IPR001005SANT/Myb domain
PfamPF143792.3E-21157203IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MALQNTQQSK DMNLVLSSDA KPRLKWTPDL HQRFVDAVSQ LGGPDKATPK SLMRVMNIHG  60
LTLYHLKSHL QKYRLGKSQV TDQSFDEKKQ EGKLELCTIA HDDDTKENEI SKSLNQRTYF  120
DAESDQLSLG VSCDGSQNQM NDIYNISLAK AFVRSLQIAR ALQMQMDVQR KLHQQIEVQR  180
HLQLRIEAQG KYLQSVLRKA QETLAGYGTS SVGVELAKAE LSQLVSMVNM SCCPSTSLSA  240
ITEIDGSISK DTQTKNLKGG ILSSLESSLT SSESSARKED QNDTRNNKNT NCIGLSLNQE  300
TKERKRSRNN ICDHDMCVEQ PSGKRFLETI DLNSKCPNEY DENGPKVIDL NYKEVEQFNE  360
YS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-202077158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016571687.10.0PREDICTED: uncharacterized protein LOC107869749 isoform X1
TrEMBLA0A2G2YDE50.0A0A2G2YDE5_CAPAN; Uncharacterized protein
STRINGSolyc05g007890.2.11e-176(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60361932
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.28e-78G2-like family protein