PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA11g03970 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 148aa MW: 17082.7 Da PI: 9.6428 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.2 | 9.5e-09 | 20 | 59 | 6 | 49 |
AP2 6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaa 49 Vr +k +g++ AeI++ + + k ++lg+f t e+A k ++ CA11g03970 20 VRKRK-NGKFCAEIKHpF-----NkKMIWLGTFVTVEDASKSYESK 59 89888.8*********55.....34****************99865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 11.957 | 12 | 78 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.2E-4 | 17 | 70 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.77E-9 | 20 | 63 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.6E-12 | 20 | 63 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MKSHKRISKN TYVKSYPIRV RKRKNGKFCA EIKHPFNKKM IWLGTFVTVE DASKSYESKN 60 LEFEELVLAK SAKMARFSKN LIKNLVLLIK LKKNQSRVTD EIEENSSMSA DENTNSSDGV 120 EEKINLFLEE ESDQELMMGI WVKISED* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025886831.1 | 1e-41 | ethylene-responsive transcription factor ERF119-like | ||||
TrEMBL | A0A2G2YDW7 | 1e-101 | A0A2G2YDW7_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400094230 | 1e-36 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 6e-14 | ERF family protein |