PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g01140
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 354aa    MW: 38925.3 Da    PI: 4.4827
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g01140genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-19109157153
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                 s+y+GVr++k +g+W+AeIrd +    k++r++lg++ taeeA +a++  r+++
  CA11g01140 109 SKYRGVRQRK-WGKWAAEIRDpF----KCRRVWLGTYSTAEEASQAYEMKRLEF 157
                 89*******9.**********65....37*******************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.27E-23109150No hitNo description
SuperFamilySSF541711.96E-16109157IPR016177DNA-binding domain
PfamPF008473.9E-12109158IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-21110157IPR001471AP2/ERF domain
PROSITE profilePS5103220.218110168IPR001471AP2/ERF domain
SMARTSM003806.8E-17110164IPR001471AP2/ERF domain
PRINTSPR003674.4E-10111122IPR001471AP2/ERF domain
PRINTSPR003674.4E-10133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MFEPQRQLQQ KGKNKREDLT RPVRKIRIVC NDPDATDSSD DERVDVSKKP KKFVREIVLP  60
IVDAFTAKKA VSEIESSCQD SNNGDKKIKN SKGLAKTPKT PGQQRPSLSK YRGVRQRKWG  120
KWAAEIRDPF KCRRVWLGTY STAEEASQAY EMKRLEFDAM AKSLSNNSNT DVCEKSSNNG  180
SNDKDRRKGG SVGCVSEEDS AESLVSHTSH TSPASVLEMD SMTSGSATVS EVNNNGKLVE  240
QKVDDAKLGL MEDSLSLAEI GAGMDFDMEM DLFFAGSDDF GQNLDDFVVE DFEDLPLCGL  300
DGDVQLPTGL PDFDFDFDFD GYNESCAWMD DAAAAPLMNG TTTTTPLNIA LCP*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016548314.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2G2YCB60.0A0A2G2YCB6_CAPAN; Uncharacterized protein
STRINGSolyc05g009450.1.11e-176(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.25e-34ERF family protein