PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g20640
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 363aa    MW: 42129.3 Da    PI: 6.4456
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g20640genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.35.1e-2221312128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 
                 ++G+rFhP+deel+ +yL k v+ k+ ++ + i+  d+y   +Pwd+ +  ++ +   + k++ yfF+k +kk++ g+r  r ++  g Wk    +k+v
  CA10g20640   2 AMGIRFHPRDEELI-RYLLKFVSCKNYSC-DNIQFEDLYGNkKPWDIFEsnST-GgdgDAKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKSV 97 
                 68************.9**********999.88*****996549****632322.2333333335******************8889************* PP

         NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ + +lvg kk   +   +  ++    W+m ey+l
  CA10g20640  98 YD-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 131
                 **.99*********996.45556679********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.3221158IPR003441NAC domain
SuperFamilySSF1019411.15E-212157IPR003441NAC domain
PfamPF023651.5E-123131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MAMGIRFHPR DEELIRYLLK FVSCKNYSCD NIQFEDLYGN KKPWDIFESN STGGDGDAKN  60
VKYFFTKLKK KKSDGRRFIR TVIGGGSWKG LDGEKSVYDG LKLVGSKKNY RYQYKGYQAD  120
DVVWTMREYS LDEKILKALR RRSLMHYEDV VLCCVKRKIN VHARDHKELG DCMPMEITSG  180
DEVVAAAMDA TLQTTQQYDS CLLNRFTSSD EHNNVFHELQ QDQNSEQLIN QVQNIEDMAP  240
FAQNHHGYVA SYIEQGTVNF QDSCPVYPFT SSEHNNAFQE LQQDQNSEQV NVVQGNNIEE  300
IVPFAQYHND DVTKKLHCFR TDALLQKSCI ASELMHWLNK QMQPFNQRHT DSWKDMTVQE  360
RM*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544549.10.0PREDICTED: uncharacterized protein LOC107844702
TrEMBLA0A2G2YP690.0A0A2G2YP69_CAPAN; Uncharacterized protein
STRINGXP_009786835.13e-96(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-12NAC domain containing protein 2