PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g18960
Common NameTGA
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 315aa    MW: 35274.8 Da    PI: 9.9039
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g18960genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.8e-112869546
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L+
  CA10g18960 28 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQDLQ 69
                7789*************************9999998888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.0E-92487IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3582670IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-72871No hitNo description
PfamPF001701.5E-82869IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-82973No hitNo description
PROSITE patternPS0003603146IPR004827Basic-leucine zipper domain
PfamPF141441.5E-33110185IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MQIETGQSRT IAASDSSDKS KEKVLDQKTL RRLAQNREAA RKSRLRKKAY VQQLENSRLK  60
LSQLEQDLQR ARQQGKYISN MGDQSNGVGA SGTLAFDAEY SRWLEEHNKH INELRNAVNS  120
HASDPELRSI VNNVTAHFDE VFRVKGNAAK ADVFHVLSGM WKTPAERCFM WIGGFRPSEL  180
LKLLVTQLEP LTEQQLAGIY NLQQSSHQAE DALSQGMEQL QQSLAETLAN GSPATEGSSG  240
DVANYMGQMA MAMGKLGTLD GFLRQADSLR QQTLQQMHRI LTTRQSARAL LAINEYFSRL  300
RALSSLWLAR PREQ*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3869460.0GQ386946.1 Capsicum annuum leucine zipper transcription factor TGA (TGA) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016543653.10.0PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A2G2YNJ20.0A0A2G2YNJ2_CAPAN; Transcription factor HBP-1b(C1)
STRINGSolyc10g080770.1.10.0(Solanum lycopersicum)
STRINGPGSC0003DMT4000609260.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-147bZIP family protein