PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA10g18380 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bZIP | ||||||||
Protein Properties | Length: 325aa MW: 35828.4 Da PI: 8.4422 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46 | 1.1e-14 | 268 | 310 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk CA10g18380 268 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLKR 310 79**************************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-11 | 264 | 319 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.634 | 266 | 311 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.4E-12 | 268 | 310 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-11 | 268 | 311 | No hit | No description |
CDD | cd14707 | 4.80E-25 | 268 | 318 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-14 | 268 | 311 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 271 | 286 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MGSQGGGGVN SVGATQAQDP KMNALARQGS LYSLTLDEVQ NQLGDLGKPL SSMNLDELLK 60 TVWTAEASQG MEGTDYGALQ HGQVASGSSL HRQSSITLTS DLSKKTVDQV WQDIQQGHKR 120 DNIDRKAQER KPTLGEITLE DFLVKAGVVA ESNPGKKSLG SVLGVDSMAL PQQSVQQQAQ 180 WSQYQIQAMH QIPPQQQPQQ QNMLPVFMPS HPVQQPLTIV PNPTIDAAYP ESQMTMSPTE 240 LLGTLSDTQT LGRKRVAPED VVEKTVERRQ KRMIKNRESA ARSRARKQAY THELENKVSR 300 LEEENERLKR QKVCFAIATF LSVF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975522 | 0.0 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016555059.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 2e-83 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A1U8FFG2 | 0.0 | A0A1U8FFG2_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A2G2YNE7 | 0.0 | A0A2G2YNE7_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
STRING | Solyc10g081350.1.1 | 1e-179 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3334 | 24 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 4e-79 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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