PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA10g13700 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 168aa MW: 19896.8 Da PI: 10.0671 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.4 | 2e-21 | 11 | 140 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkge 98 G+rF+Pt++el+ +yL + +k+ + ++++ v++y ePw+ +++++ yf ++++k++++ r +r++ +g+Wk +gk +ev++ kg+ CA10g13700 11 TGYRFNPTNKELL-KYLLGFAINKPlPQQYQFMQLVNLYADkEPWEVF-DSTNNDTPRYFITQHNKEKEQHVRVKRTVGiNGTWKLQGKVNEVFDDKGK 107 7************.77777777777244456699999997559****6.555678899******************66569****************** PP NAM 99 lvglkktLvfy...kgrapkgektdWvmheyrl 128 l+g k L + k++++++ + +W+m ey+l CA10g13700 108 LMGYVKNLKYKphhKKSSNNPPNGEWLMTEYSL 140 **********877677888889*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.222 | 9 | 163 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-22 | 10 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.8E-13 | 11 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MASHHQAKDM TGYRFNPTNK ELLKYLLGFA INKPLPQQYQ FMQLVNLYAD KEPWEVFDST 60 NNDTPRYFIT QHNKEKEQHV RVKRTVGING TWKLQGKVNE VFDDKGKLMG YVKNLKYKPH 120 HKKSSNNPPN GEWLMTEYSL YDHYVDPKKI KNRDYVVCKI KKKEERS* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016546502.1 | 1e-92 | PREDICTED: NAC domain-containing protein 53-like | ||||
TrEMBL | A0A2G2YD55 | 1e-114 | A0A2G2YD55_CAPAN; Uncharacterized protein | ||||
STRING | XP_009601217.1 | 1e-53 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 3e-14 | NAC domain containing protein 53 |