PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | CA10g09910 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 18607.5 Da PI: 10.1016 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.8 | 1.6e-47 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+ +yLk+kv g+kl++ +vi ++iy+++PwdLp ++ +e+ewyfF++r +k+ +g r+nr+t++g+Wkatg+dk+++ ++ CA10g09910 11 PGFRFHPTEEELLEFYLKNKVLGRKLRC-DVIGLLNIYSHDPWDLPGLATIGEREWYFFVPRYRKHGSGGRPNRTTQKGFWKATGSDKKIFGLshPRNI 108 9***************************.99***************8777899*************************************976556778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy+grap+g+ktdWvm+e+rl CA10g09910 109 IGLKKTLVFYTGRAPRGSKTDWVMNEFRL 137 ***************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 48.656 | 9 | 154 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.4E-53 | 10 | 144 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-26 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 161 aa Download sequence Send to blast |
MEESAMELDL PGFRFHPTEE ELLEFYLKNK VLGRKLRCDV IGLLNIYSHD PWDLPGLATI 60 GEREWYFFVP RYRKHGSGGR PNRTTQKGFW KATGSDKKIF GLSHPRNIIG LKKTLVFYTG 120 RAPRGSKTDW VMNEFRLPDP FSSPQVLYIS VFFLHLNSKI * |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-47 | 3 | 137 | 8 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016544591.1 | 1e-105 | PREDICTED: NAC domain-containing protein 67 | ||||
Swissprot | Q10S65 | 2e-72 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A1U8EDX1 | 1e-104 | A0A1U8EDX1_CAPAN; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2G2YKB6 | 1e-104 | A0A2G2YKB6_CAPAN; NAC domain-containing protein 67 | ||||
STRING | XP_009605868.1 | 7e-91 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-78 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
---|---|---|---|
|