PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA10g07350 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 415aa MW: 46054.3 Da PI: 4.5126 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 113.5 | 1.3e-35 | 104 | 204 | 1 | 97 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrlw++eDei lLqG++++++++g s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ ++k+ sgke++f+++hdq +f++s ki CA10g07350 104 KLFQRLWTDEDEIELLQGFLEYTTQRGGinssSHHHDTTAFYDQIKSRLQLDFNKNQLVEKLRRLKKKYRNVMSKMGSGKEFVFKSSHDQATFDISCKI 202 579***********************9877644555*************************************************************** PP DUF573 96 Wg 97 W CA10g07350 203 WS 204 *6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.5E-33 | 106 | 204 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 415 aa Download sequence Send to blast |
MASVEEDQHA VHNDDDLEDD EDDEEGGCPP QNEVVVDEDD DVDVDDDEDS TSTPPVPVSN 60 HFGSREVTIA VVGEPKRQRI NEFPVATTTV VEEKKPLAFD DSRKLFQRLW TDEDEIELLQ 120 GFLEYTTQRG GINSSSHHHD TTAFYDQIKS RLQLDFNKNQ LVEKLRRLKK KYRNVMSKMG 180 SGKEFVFKSS HDQATFDISC KIWSNTAPIV IRSSAPPPQE DGGFDDVDSH LNLNANFIDH 240 SPNINLNPNP DGIDVKTPKS RKRFRGGAVQ AEEKPGFIQQ YYQPSGGGTN VILPMSSSPA 300 LMPTPVPMAA PPLTATAASI PGLIEETVRS CLSPILKELL NNVTNLNGSR SFGFGIALGP 360 TPLGFGSSAV SSDMKLDEKW RKQQMLELEV YLRRLELVQD QIKAQLEELR SMTS* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016545555.1 | 0.0 | PREDICTED: uncharacterized protein LOC107845638 | ||||
TrEMBL | A0A1U8EQB6 | 0.0 | A0A1U8EQB6_CAPAN; Uncharacterized protein | ||||
TrEMBL | A0A2G2YKQ9 | 0.0 | A0A2G2YKQ9_CAPAN; uncharacterized protein LOC107845638 | ||||
STRING | PGSC0003DMT400009206 | 0.0 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4052 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 6e-66 | DNA-binding storekeeper protein-related transcriptional regulator |