PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA10g00710 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 130aa MW: 15095.4 Da PI: 10.3488 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 32.2 | 2.9e-10 | 41 | 88 | 49 | 98 |
DUF573 49 vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 + ql +KirrLK K+ ++ k ++gke +++k+h+qk +elskkiW++ CA10g00710 41 DYRVQLQNKIRRLK-KYMNNAGK-ERGKERVLTKAHEQKEYELSKKIWDK 88 3468*********8.67777777.7***********************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 9.3E-9 | 18 | 87 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence Send to blast |
MAADEGETKE SKKSKKKQEK EVETPVKTKA TEHVKLQFFR DYRVQLQNKI RRLKKYMNNA 60 GKERGKERVL TKAHEQKEYE LSKKIWDKEK SDKWVQVEVV KVDNVAVSMG LKKGGVKDNG 120 VLFEVNEEK* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016570841.1 | 1e-36 | PREDICTED: uncharacterized protein LOC107868687 | ||||
TrEMBL | A0A2G2YIE5 | 2e-85 | A0A2G2YIE5_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400079215 | 2e-24 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3042 | 19 | 47 |