PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA09g12140
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 372aa    MW: 42447.6 Da    PI: 4.1725
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA09g12140genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-191371256
         AP2  2 gykGVrwdkkrgrWvAeIrdpse.ng...kr.krfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr++  +g+WvAeIr+p++  +    + kr +lg+f t  eAa+ +++a+k+++g+
  CA09g12140 13 TYRGVRQRT-WGKWVAEIREPVNnTNehqSNgKRLWLGTFSTDAEAARTYDEAAKAMYGH 71
                69****999.**********777444695449*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.42E-281279No hitNo description
Gene3DG3DSA:3.30.730.108.7E-281379IPR001471AP2/ERF domain
PROSITE profilePS5103222.6551378IPR001471AP2/ERF domain
SMARTSM003807.6E-321384IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-191379IPR016177DNA-binding domain
PfamPF008472.1E-141371IPR001471AP2/ERF domain
PRINTSPR003677.0E-91425IPR001471AP2/ERF domain
PRINTSPR003677.0E-94460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MRGKGGPENL ECTYRGVRQR TWGKWVAEIR EPVNNTNEHQ SNGKRLWLGT FSTDAEAART  60
YDEAAKAMYG HDAILNFPEY CVQNAQLAND LLHVPIAQTT SLESSESSVE DAIVESDLQT  120
DEKIFVDDRC VVERNLCLEE KHGSSDCCLN TKSVVLQVYH SIDAIKGFNC SSTIDLEPIR  180
EPTSSYVKVE TPPKNDFMQH RDLERLDDVN EGSNNLCILH QENTEVKSNY SMYHKDVLRP  240
NESYDFVDQV LLPCPATTPQ DYDCSANTLQ EQPLDFRLNA DMRSNMGFME RLLMEDNNTT  300
EATNILNTFC LNENIDESYQ FQSFLDELSD VNNLKNEEQF DYFNYNQQID LPNYQTNAAV  360
HSDGFISKED E*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-171478360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-171478663ATERF1
3gcc_A3e-171478663ATERF1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019248910.11e-147PREDICTED: dehydration-responsive element-binding protein 2B-like
TrEMBLA0A2G3BKG90.0A0A2G3BKG9_CAPCH; Dehydration-responsive element-binding protein 2D
STRINGXP_009768300.11e-131(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA79651530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-30ERF family protein