PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA09g04250
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 314aa    MW: 35265.7 Da    PI: 10.1086
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA09g04250genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like60.82.7e-1968118455
     G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 ++Wt+ LHe F++av+qL G+ +  Pk+ile+m+v+ Lt+ +v+SHLQk R+
  CA09g04250  68 IEWTEYLHEIFMKAVRQL-GEGNCYPKNILEVMGVPNLTRMQVASHLQKCRT 118
                 68****************.9*****************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.15E-1465118IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.6E-1967119IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-1868118IPR006447Myb domain, plants
PfamPF002496.9E-670116IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MQREKVGENP MRVEDIGNNI IHEAENDVGS NGKYKLKRKR GRKNLIETNV GERQRSNVNK  60
AVRQKVCIEW TEYLHEIFMK AVRQLGEGNC YPKNILEVMG VPNLTRMQVA SHLQKCRTNN  120
WRAPGERKFV PHSSGQGSSS SSQQPSFFKN FGTMPRLHTC VSNLQRNPNQ VQRGPEFLVP  180
SLSTSNIFSR GESSIQKFYH PQFQVQPHHP PFGNSFNNPF FPVQSNIGGG IQQYRPFFGM  240
PGSQGLQGPI IGNINYMPNL EFNRGSHQAQ SIYSLDLNNM ANNNLGPKSA TLPNEQGRGF  300
DQVCFDDLVS AST*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015164525.14e-95PREDICTED: two-component response regulator ARR10-like
TrEMBLA0A2G2YQW70.0A0A2G2YQW7_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000851382e-94(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07210.15e-13response regulator 21