PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA09g04250 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | G2-like | ||||||||
Protein Properties | Length: 314aa MW: 35265.7 Da PI: 10.1086 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 60.8 | 2.7e-19 | 68 | 118 | 4 | 55 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++Wt+ LHe F++av+qL G+ + Pk+ile+m+v+ Lt+ +v+SHLQk R+ CA09g04250 68 IEWTEYLHEIFMKAVRQL-GEGNCYPKNILEVMGVPNLTRMQVASHLQKCRT 118 68****************.9*****************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.15E-14 | 65 | 118 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.6E-19 | 67 | 119 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.2E-18 | 68 | 118 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.9E-6 | 70 | 116 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence Send to blast |
MQREKVGENP MRVEDIGNNI IHEAENDVGS NGKYKLKRKR GRKNLIETNV GERQRSNVNK 60 AVRQKVCIEW TEYLHEIFMK AVRQLGEGNC YPKNILEVMG VPNLTRMQVA SHLQKCRTNN 120 WRAPGERKFV PHSSGQGSSS SSQQPSFFKN FGTMPRLHTC VSNLQRNPNQ VQRGPEFLVP 180 SLSTSNIFSR GESSIQKFYH PQFQVQPHHP PFGNSFNNPF FPVQSNIGGG IQQYRPFFGM 240 PGSQGLQGPI IGNINYMPNL EFNRGSHQAQ SIYSLDLNNM ANNNLGPKSA TLPNEQGRGF 300 DQVCFDDLVS AST* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015164525.1 | 4e-95 | PREDICTED: two-component response regulator ARR10-like | ||||
TrEMBL | A0A2G2YQW7 | 0.0 | A0A2G2YQW7_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400085138 | 2e-94 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA813 | 23 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07210.1 | 5e-13 | response regulator 21 |