PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA09g02900
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 413aa    MW: 44780.4 Da    PI: 4.4298
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA09g02900genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.4e-10106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E+  ++++  ++G g+Wk+I+r    +Rt+ q+ s+ qky
       CA09g02900 106 SWTELEHRSFLRGLDKYGRGDWKSISRNCVITRTPTQVASHAQKY 150
                      6**************************99989************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.24E-91677IPR009057Homeodomain-like
SMARTSM007170.00961970IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.2E-42368IPR009057Homeodomain-like
PROSITE profilePS500904.8552368IPR017877Myb-like domain
CDDcd001671.76E-42365No hitNo description
PROSITE profilePS5129414.68599155IPR017930Myb domain
SMARTSM007173.0E-8103153IPR001005SANT/Myb domain
SuperFamilySSF466891.72E-14103155IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-15104153IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.605.7E-9106152IPR009057Homeodomain-like
PfamPF002493.7E-9106150IPR001005SANT/Myb domain
CDDcd001673.68E-8106151No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MFESFLVDPK KMSTDRTCNS SFWTKDEDKI LENTLAIYSD DKDLFTKMEE ALPGKSRDDI  60
INHYNILIED VEAIDSGRVP LPNYLELQSD SNQNSRADVE WRRGASWTEL EHRSFLRGLD  120
KYGRGDWKSI SRNCVITRTP TQVASHAQKY FKRLQAVPKE KRRASILNIT SADAEAAGTS  180
QAVPSTKNEI MLPRESINAE QTIAVAEGES SGHDAVFVNG MDSLNPDRNG EVIFSIDDII  240
MEEEDANETG FLVDTGRSLL PSEQPCAAAS TGAYGHPITR IGSDLEALLT EPREEDNDIN  300
SIFVVRKAPT SHEVLLNAAH SGISSYAAAS FGAENAPESN VAAYSGMSSY ADASSDAVNA  360
PDNMVAAHSG MTNFAVTSRF ASNAPQATVA AHASQLPPFA LSSNFDVGDA PM*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016578013.11e-147PREDICTED: transcription factor DIVARICATA-like
TrEMBLA0A2G2YQ430.0A0A2G2YQ43_CAPAN; Uncharacterized protein
STRINGXP_009798833.11e-137(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44541329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-47MYB family protein