PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA08g10300
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 351aa    MW: 37579.6 Da    PI: 9.8107
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA08g10300genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.42.4e-16139194358
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l  +++++ +
  CA08g10300 139 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNE 194
                 68******************************************999999998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-12136192No hitNo description
SMARTSM003381.7E-19137201IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.622139194IPR004827Basic-leucine zipper domain
PfamPF001706.1E-14140193IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-12141191No hitNo description
PROSITE patternPS000360144159IPR004827Basic-leucine zipper domain
PfamPF124981.0E-42208339IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MASSSSSSHQ NDVVEIKDES LSSAANRNSS TALNLKPATS FAKNLKPQNS SSTAPDKGSE  60
TAGASQSVSH IGIKGSGQEL TNIQDKDSGG PVGIPSLPPV QKKPGVQVKS TTSGSSRDQS  120
DDDEAEGEAE TTQGTDPADV KRVRRMLSNR ESARRSRRRK QAHLTELETQ VSQLRVENSS  180
LLKRLTDISQ KYNESAVDNR VLKADVETLR AKASLLKLVK MAEETVKRVT GLQPLFQAMS  240
DVTSMAMPSF SGSPSDTSAD AAVPVSNDPK HHYYQQPPNN HMPTHDPRIQ NGMVDVPPIG  300
NVQQNPVTSS VGGNKMGRTS SMQRVASLEH LQKRIRGEVS SCGTQGRGEQ *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153160RRSRRRKQ
2155160SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0616481e-169AY061648.1 Nicotiana tabacum bZIP transcription factor (BZI-1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016538381.10.0PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-112CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2G2YYT80.0A0A2G2YYT8_CAPAN; Light-inducible protein CPRF2
STRINGSolyc01g097330.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.17e-45bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]