PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA08g07160
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BES1
Protein Properties Length: 714aa    MW: 80103.4 Da    PI: 6.2606
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA08g07160genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822129.92.9e-40652211136
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl.eeaeaagssas. 87 
                 ggs+r ++ +E+E++k+RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++          +++kp   +  a+g+s++ 
  CA08g07160  65 GGSRRCRPVEEKERTKLRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsqpqatllHHFKPSfGTGTAGGTSTTm 163
                 6899*****************************************************************966766666666677777778888888884 PP

      DUF822  88 ........aspesslq.sslkssalaspvesysaspksssfpspssldsislasaasl 136
                          +++++   ++  +s ++  ++++++++ks+ +ps+s +ds s+a ++++
  CA08g07160 164 vtslsphiPTQHTPPAaLKSMTSGFQNTADQSACQMKSVFVPSSSPYDSSSTARSQTS 221
                 3332222222333333344456778889999999999999999999999988755433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.9E-3666212IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514458.63E-179259696IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.802.7E-195262695IPR013781Glycoside hydrolase, catalytic domain
PfamPF013731.5E-106268688IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.7E-69299313IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.7E-69320338IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.7E-69342363IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.2E-8425434IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007503.7E-69435457IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.7E-69508527IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.7E-69542558IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.7E-69559570IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.7E-69577600IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.2E-8580590IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007503.7E-69617639IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.2E-8668682IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008421.2E-8683697IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    Send to blast
MQRYDTNEDD EEMGMDVKEE DDEDDDDEEK NAAMHAMAGF DGVHGSSSSS RFQHHQQYQE  60
QPTPGGSRRC RPVEEKERTK LRERQRRAIT AKILAGLRRH GNYNLRVRAD INDVIAALAR  120
EAGWVVLPDG TTFPSRSQPQ ATLLHHFKPS FGTGTAGGTS TTMVTSLSPH IPTQHTPPAA  180
LKSMTSGFQN TADQSACQMK SVFVPSSSPY DSSSTARSQT SAIVADGQVT QNDPFLVGCV  240
DSIDKQVIDM HTKLQERDFA GTHYIPVYVM LPLGVINMKS ELVDADGLVK QLRMLKSINV  300
DGVMVDCWWG IVEANAPQEY NWNGYKRLFQ VVREHKLKIK VMMSFHECGG NIGDDVCIPL  360
PHWVSEIGRS NPDIYFTDRA GRRNPECLSW GIDKERVLRG RTAVEVYFDY MRSFRVGFDE  420
FFEDGIISMV EVGLGPCGEL RYPSNPVKHG WRYPGVGEFQ CYDQYLLKSL KKAAEARGHS  480
FWARAPDNAG SYNSRPQETG FFCDGGDYDG YYGRFFLNWY SQVLVDHADR VLSLAKLAFD  540
GTCIAAKLSG IHWWYKTAGH AAELTAGFYN PSNRDGYIVI AAMLKKHGAA LNFKCAEMSM  600
LEQAVDFSEA LVDPEGLAWQ VLNAAWDVSL PVCSENALLC HDRGGYNCLL EKAKPFNDPD  660
GKHIFAFTYL RLSPLLMDGQ NYMEFERFVK RMHGKVLEVF RLSINSFGRF VVD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdr_A1e-15026369410443Beta-amylase
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754400.0HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016538056.10.0PREDICTED: beta-amylase 7-like
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A1U8DV750.0A0A1U8DV75_CAPAN; Beta-amylase
STRINGSolyc01g094580.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]