PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA07g21320 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 331aa MW: 37941.6 Da PI: 7.5419 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.1 | 2.1e-50 | 32 | 159 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPtdeelv +yL++kve++++++ e ik++diyk+ePwdLpk+ + +ekewy+++kr +ky+++ r+nr+t sg+Wkatg d++++s+ +e CA07g21320 32 LPGFRFHPTDEELVGFYLRRKVEKRPINI-ELIKQIDIYKYEPWDLPKSSNMGEKEWYYYCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSStaCHE 129 59***************************.89***************9888999***************************************877777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lv+y+g+a kg+ktdW+mhe+rl CA07g21320 130 CIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 159 8***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 51.375 | 31 | 197 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.45E-53 | 32 | 196 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.9E-24 | 33 | 159 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005992 | Biological Process | trehalose biosynthetic process | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006561 | Biological Process | proline biosynthetic process | ||||
GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process | ||||
GO:0010120 | Biological Process | camalexin biosynthetic process | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:1900056 | Biological Process | negative regulation of leaf senescence | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MEVENNLSNN KVTSKCYTRE EDDHEEVEDM ALPGFRFHPT DEELVGFYLR RKVEKRPINI 60 ELIKQIDIYK YEPWDLPKSS NMGEKEWYYY CKRGRKYRNS IRPNRVTGSG FWKATGIDRP 120 IYSSTACHEC IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP AENDKSTKHI QAKSIAQEAV 180 SILIHREVWT LCRIFKGNGS DKKCLPAEWR GSAAAKRSPV VDTSSQTCST DSSSDNYVIS 240 FAAPAAIVMH NNNSTITHET KPFISGHVHD QDISNNNYCN QQLIMGQLMS SSSVYTHQTP 300 SSSFGQDMNE WLKNGDYWDE LRSILELDRF * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-47 | 33 | 203 | 22 | 174 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00310 | DAP | Transfer from AT2G43000 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016579580.1 | 0.0 | PREDICTED: transcription factor JUNGBRUNNEN 1 | ||||
Swissprot | Q9SK55 | 4e-87 | NAC42_ARATH; Transcription factor JUNGBRUNNEN 1 | ||||
TrEMBL | A0A2G3C3D0 | 0.0 | A0A2G3C3D0_CAPCH; Transcription factor JUNGBRUNNEN 1 | ||||
STRING | XP_009778771.1 | 1e-147 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1697 | 24 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 6e-86 | NAC domain containing protein 42 |