PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g18030
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 314aa    MW: 35650.6 Da    PI: 4.6923
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g18030genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.61e-181664150
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50
                lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp +
  CA07g18030 16 LPPGFRFHPTDEELVVHYLKKKIASVPLPV-SIIAEVDLYKFDPWELPVR 64
                79****************************.89**************942 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-21969IPR003441NAC domain
PROSITE profilePS5100519.216149IPR003441NAC domain
PfamPF023654.2E-91771IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MESTDSSSGS HQQPQLPPGF RFHPTDEELV VHYLKKKIAS VPLPVSIIAE VDLYKFDPWE  60
LPVRFLLFFC PIFFSVQLNG KSEFLFQIFI CYFDFYSSTC VCEIFFFLNI IGVSSILVIF  120
LLIFVFLLVL FYFLNMQLDD WVLCRIYKKS NTQRPIDHER DDLNIDMMMG SSSSINPSCI  180
ANNSMSLPNL FGQPKIPQLK SSNFGSALLE NDPNLYDQSG SQFSSKRPLG NLYWNDQDGA  240
GSNDNSHQST KRFLTDNMED GLNMNVRADE QNGSIVSLLS QLPQTPSLHQ QQVLGSLSDG  300
VFRQPYSGMN WYS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-221615115170Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC1430391e-122KC143039.1 Solanum lycopersicum sinor-like protein 1 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016581260.11e-168PREDICTED: NAC transcription factor 56-like
TrEMBLA0A1U8HCZ31e-166A0A1U8HCZ3_CAPAN; NAC transcription factor 56-like
STRINGPGSC0003DMT4000496641e-139(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18142466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-27NAC domain containing protein 25