PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA07g16790 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 155aa MW: 18151.9 Da PI: 9.7739 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.8 | 3.4e-26 | 15 | 136 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 GfrFhPtd el+ +yL v +k+++ i d+y++ePwd+ k ++++ +yfF++ +kk++ ++r r++ +g Wk++ k k+v+s+kg+ g CA07g16790 15 EGFRFHPTDRELM-KYLILFVISKPFSKLVPIVLEDLYTIEPWDIF-K-GKKDRALYFFTELKKKKTGNTRYVRSVGEGSWKSQDKGKAVCSEKGSILG 110 7************.9**********9997779999**********6.3.3567899******************************************* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 k++L + + p + +W+m+ey++ CA07g16790 111 YKRSLRYQNPGLPL-HDGQWLMKEYSI 136 *******9655555.799*******86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.222 | 13 | 154 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.58E-25 | 13 | 143 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-15 | 15 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MEYNKEVEEN SAHTEGFRFH PTDRELMKYL ILFVISKPFS KLVPIVLEDL YTIEPWDIFK 60 GKKDRALYFF TELKKKKTGN TRYVRSVGEG SWKSQDKGKA VCSEKGSILG YKRSLRYQNP 120 GLPLHDGQWL MKEYSICDDV KKHLRQRFHV CSHS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-13 | 1 | 136 | 3 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016579194.1 | 8e-97 | PREDICTED: NAC domain-containing protein 30-like | ||||
TrEMBL | A0A2G2Z4Y1 | 1e-111 | A0A2G2Z4Y1_CAPAN; Uncharacterized protein | ||||
STRING | XP_009769005.1 | 3e-66 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 2e-22 | NAC domain containing protein 96 |