PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g13850
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 413aa    MW: 46452.4 Da    PI: 5.247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g13850genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-19179228255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+g
  CA07g13850 179 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAAMAYDREAYKLRG 228
                 59******9.**********965...5*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.26E-33178238No hitNo description
SuperFamilySSF541712.81E-22179237IPR016177DNA-binding domain
SMARTSM003801.1E-37179242IPR001471AP2/ERF domain
PROSITE profilePS5103222.84179236IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-32179237IPR001471AP2/ERF domain
PRINTSPR003676.9E-11180191IPR001471AP2/ERF domain
PfamPF008479.8E-12180228IPR001471AP2/ERF domain
PRINTSPR003676.9E-11202218IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MMAMAEEHID FDDNTFERQQ RRPVFEEASM SNRRFKKIKS PERHAYSQSS VPQSPSQSSV  60
TYNNPTSMAF PPPPSSSRLV FPFAYDGTQQ SNATPMFHPQ QQNQQQMISF SPPQCLYPPY  120
FAGELGPSQN QQQLLQYWNE TLNLSPRGRM MMMSRLGQDS RGYFRPQQLQ VQPISATKLY  180
RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD TAEDAAMAYD REAYKLRGDN AKLNFPELFI  240
GKDRGEASTA TNSSPSSPIT PHESSLPQQI SESVELQPIN NELLPPPLPP PPQPPPEGDN  300
HDEESAIGSS EVTTSENLES FGVIEGSASS SQSSELVWGD MAEAWFNAIP AGWGPGSPVW  360
DDLDANNNLM FPPSLHFGNF HQPEPHNPDP HQHHDNTNRD PSSPSCPMRP FF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-20178236160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-20178236463ATERF1
3gcc_A1e-20178236463ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00458DAPTransfer from AT4G28140Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016555516.10.0PREDICTED: ethylene-responsive transcription factor ERF054
TrEMBLA0A2G2Z3R50.0A0A2G2Z3R5_CAPAN; Ethylene-responsive transcription factor
STRINGPGSC0003DMT4000472650.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47182136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.14e-52ERF family protein