PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g03300
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 368aa    MW: 40403.3 Da    PI: 4.4672
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g03300genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-183787155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr++  +g+WvAeIr+p   + r + ++lg+f+  ++Aa a++aa++kl+g
  CA07g03300 37 CKYKGVRQRT-WGKWVAEIREP---N-RgACVWLGTFDNSYDAAVAYDAAALKLYG 87
                79*****999.**********8...3.35*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.72E-173798No hitNo description
PfamPF008474.1E-113787IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-263897IPR001471AP2/ERF domain
SMARTSM003805.5E-3038102IPR001471AP2/ERF domain
SuperFamilySSF541714.9E-183896IPR016177DNA-binding domain
PROSITE profilePS5103220.9823896IPR001471AP2/ERF domain
PRINTSPR003674.7E-73950IPR001471AP2/ERF domain
PRINTSPR003674.7E-76177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MSSKFSLSPQ RRSKKPTQAT SQKGRMKGKG GPENATCKYK GVRQRTWGKW VAEIREPNRG  60
ACVWLGTFDN SYDAAVAYDA AALKLYGPDK AQLNLPHLYN IPAQAQHESS RPVVTPTPAP  120
VPAPADPSPS IYNVASPSTW NVKNDPSVYF NNDFSSTDFS ATSISLDMNE KADHEEFVEN  180
VSSRPAPTLA PASFSLVPSP SVYNVASPST WNVENDPSLY LNNDFSSTDF SATSFSLDMN  240
EKADHEEFVK NESSRSAPTP AATPVSLVPS PSIYNVASPS TWNVEIDPSL YFNNDFEIDP  300
SLYFNNDFAS TDFSATSFSL DMNEKADHEE FVEKNNQISK ELGEDMWSDL NLLPEINDTY  360
HRMGGGS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-153996360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579319.10.0PREDICTED: dehydration-responsive element-binding protein 2C-like
TrEMBLA0A2G2Z0H60.0A0A2G2Z0H6_CAPAN; Dehydration-responsive element-binding protein 2D
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31552247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.18e-33ERF family protein