PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | CA07g02120 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 118aa MW: 13553.5 Da PI: 10.194 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.4 | 2e-21 | 3 | 113 | 2 | 111 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 GfrFhPtdeel+ +yLk+ v + l+ ++ik +d+++ +ePw++ + +ee+ yf s+ ++ +++ k+ +r++ +g+Wk + + +++ ++ k CA07g02120 3 SLGFRFHPTDEELI-NYLKNVVLHGMLPPRDFIKVADLFEdLEPWEIM--AGSEEQTHYFLSQLKRFKNSTKKFSRTVGKGTWKGQNSGNPIEDNglkK 98 57************.9**********999999****998626*****6..445666778888888888889999*******************988877 PP NAM 97 gelvglkktLvfykg 111 ++++g k++L + + CA07g02120 99 NTTIGYKRSLKYKSD 113 788********9744 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.58E-19 | 2 | 115 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 20.425 | 2 | 117 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.7E-14 | 5 | 113 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 118 aa Download sequence Send to blast |
MLSLGFRFHP TDEELINYLK NVVLHGMLPP RDFIKVADLF EDLEPWEIMA GSEEQTHYFL 60 SQLKRFKNST KKFSRTVGKG TWKGQNSGNP IEDNGLKKNT TIGYKRSLKY KSDNGKR* |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016578763.1 | 9e-74 | PREDICTED: putative NAC domain-containing protein 94 | ||||
TrEMBL | A0A2G3BWL3 | 2e-76 | A0A2G3BWL3_CAPCH; Uncharacterized protein | ||||
STRING | XP_009604942.1 | 7e-36 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G39820.1 | 6e-17 | NAC domain containing protein 94 |