PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g00500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 416aa    MW: 47202.4 Da    PI: 5.2747
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g00500genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.43.7e-46611882128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 ppGfrF Ptd elv++yLk+k+++ +l+l + + e++iyk++P+ +  + + +++e+ wy F++rd+ky++g r+nr++ +gyWkatg dkevl++k++
  CA07g00500  61 PPGFRFYPTDAELVTHYLKRKLANLPLHL-NKMYELNIYKYNPEIIAaQvMPTTRENVWYIFTPRDRKYKNGYRPNRSAGNGYWKATGADKEVLDRKKN 158
                 9****************************.77**************843344457789***************************************** PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +g+kktLvfy g+apkgektdW+mhe+r+
  CA07g00500 159 IIGMKKTLVFYIGKAPKGEKTDWIMHEFRV 188
                 ****************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-5457214IPR003441NAC domain
PROSITE profilePS5100552.04160215IPR003441NAC domain
PfamPF023655.4E-2661188IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MENHHSSPTN NANISEEDLN NITNANHINE LPVIAVLSNY DSNGKQIQSA EEIESTINSF  60
PPGFRFYPTD AELVTHYLKR KLANLPLHLN KMYELNIYKY NPEIIAAQVM PTTRENVWYI  120
FTPRDRKYKN GYRPNRSAGN GYWKATGADK EVLDRKKNII GMKKTLVFYI GKAPKGEKTD  180
WIMHEFRVPN VPNIAERGAN DMTLDDWVLC KIYKRTEIDN SMFTQRKRNR EDYDDIVEAL  240
HTSDGQAHDS SAENSLSSAS QDSTRHDFNY FDMSYNNPMP TFCNMPWSTT SAYDYQACAP  300
QFNSGDAPMM IQPISSAMAT NTSIGHDHTT KTEGFGMPCF GACFVGGYTG QQCYGECVDH  360
GKFVSSNNTD QYNPNDCVDQ YLVNNYEMID YNTMCLPEYT TNNFVGEGSK SKENC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-515921516165NO APICAL MERISTEM PROTEIN
1ut4_B1e-515921516165NO APICAL MERISTEM PROTEIN
1ut7_A1e-515921516165NO APICAL MERISTEM PROTEIN
1ut7_B1e-515921516165NO APICAL MERISTEM PROTEIN
4dul_A1e-515921516165NAC domain-containing protein 19
4dul_B1e-515921516165NAC domain-containing protein 19
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016578729.10.0PREDICTED: NAC domain-containing protein 72-like
TrEMBLA0A2G2YZN90.0A0A2G2YZN9_CAPAN; NAC domain-containing protein 2
STRINGXP_009793862.11e-143(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA139361213
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.17e-56NAC family protein