PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA07g00500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 416aa MW: 47202.4 Da PI: 5.2747 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 148.4 | 3.7e-46 | 61 | 188 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrF Ptd elv++yLk+k+++ +l+l + + e++iyk++P+ + + + +++e+ wy F++rd+ky++g r+nr++ +gyWkatg dkevl++k++ CA07g00500 61 PPGFRFYPTDAELVTHYLKRKLANLPLHL-NKMYELNIYKYNPEIIAaQvMPTTRENVWYIFTPRDRKYKNGYRPNRSAGNGYWKATGADKEVLDRKKN 158 9****************************.77**************843344457789***************************************** PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLvfy g+apkgektdW+mhe+r+ CA07g00500 159 IIGMKKTLVFYIGKAPKGEKTDWIMHEFRV 188 ****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.55E-54 | 57 | 214 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.041 | 60 | 215 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.4E-26 | 61 | 188 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
MENHHSSPTN NANISEEDLN NITNANHINE LPVIAVLSNY DSNGKQIQSA EEIESTINSF 60 PPGFRFYPTD AELVTHYLKR KLANLPLHLN KMYELNIYKY NPEIIAAQVM PTTRENVWYI 120 FTPRDRKYKN GYRPNRSAGN GYWKATGADK EVLDRKKNII GMKKTLVFYI GKAPKGEKTD 180 WIMHEFRVPN VPNIAERGAN DMTLDDWVLC KIYKRTEIDN SMFTQRKRNR EDYDDIVEAL 240 HTSDGQAHDS SAENSLSSAS QDSTRHDFNY FDMSYNNPMP TFCNMPWSTT SAYDYQACAP 300 QFNSGDAPMM IQPISSAMAT NTSIGHDHTT KTEGFGMPCF GACFVGGYTG QQCYGECVDH 360 GKFVSSNNTD QYNPNDCVDQ YLVNNYEMID YNTMCLPEYT TNNFVGEGSK SKENC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-51 | 59 | 215 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-51 | 59 | 215 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-51 | 59 | 215 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-51 | 59 | 215 | 16 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-51 | 59 | 215 | 16 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-51 | 59 | 215 | 16 | 165 | NAC domain-containing protein 19 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016578729.1 | 0.0 | PREDICTED: NAC domain-containing protein 72-like | ||||
TrEMBL | A0A2G2YZN9 | 0.0 | A0A2G2YZN9_CAPAN; NAC domain-containing protein 2 | ||||
STRING | XP_009793862.1 | 1e-143 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13936 | 12 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 7e-56 | NAC family protein |