PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA06g25420

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 468aa MW: 53668.3 Da PI: 4.3955

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA06g25420	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	65	2.2e-20	14	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 + G+rFhPtdeel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + +++++ fF+k +k+++ g+r r ++ g Wk +k+v+ CA06g25420 14 ALGIRFHPTDEELI-RYLLKFVSCKSYSC-DNIRLQDLYGNkKPWEIFEsnslgDEYTNKNVRCFFTKLKKNKSDGTRFIRtVIGGGSWKGLDGEKSVY 110 67**********.9******999.789999999654963344442223445669*************8889************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +lvg kk + + ++ W+m ey+l CA06g25420 111 D-GPKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 143 .999*****996.45556679******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	7.19E-23	10	167	IPR003441	NAC domain
PROSITE profile	PS51005	24.206	13	170	IPR003441	NAC domain
Pfam	PF02365	2.5E-11	16	143	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence Send to blast
MSEISSNSTN PVMALGIRFH PTDEELIRYL LKFVSCKSYS CDNIRLQDLY GNKKPWEIFE 60 SNSLGDEYTN KNVRCFFTKL KKNKSDGTRF IRTVIGGGSW KGLDGEKSVY DGPKLVGSKK 120 NYRYQYKGYQ ADDVVWTMRE YSLDEKILKA LRRRRLIHYE DVVLCCVKDK INVHARDHKE 180 LGDYTPSEHN NVFHELQQDQ NSAQLVNQVQ NIKDMMAPFV ASYIEQGTAN FQDSSPVYPF 240 TSSYKHNNAF QELQQDQNCE QLIKQVQTVD EMVPSASHDS YPVYPFTSSE HYAFHELQQD 300 QNSEQVNVIH QENHIEETVP FAQYHNDDVT SYSEEGATNF QEYNVDCYRG ADFSSTLADL 360 LNDIVTQPQL PIRIDECGYD YQLAQQMGSS SMVLNEGNID AAAFVSDQWS TCCEEQVQNL 420 EEAVRITFTE PTAPLFINND ECFPMEGLFD TDDFIAADLS WASDLFD*

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence Send to blast

MSEISSNSTN PVMALGIRFH PTDEELIRYL LKFVSCKSYS CDNIRLQDLY GNKKPWEIFE  60
SNSLGDEYTN KNVRCFFTKL KKNKSDGTRF IRTVIGGGSW KGLDGEKSVY DGPKLVGSKK  120
NYRYQYKGYQ ADDVVWTMRE YSLDEKILKA LRRRRLIHYE DVVLCCVKDK INVHARDHKE  180
LGDYTPSEHN NVFHELQQDQ NSAQLVNQVQ NIKDMMAPFV ASYIEQGTAN FQDSSPVYPF  240
TSSYKHNNAF QELQQDQNCE QLIKQVQTVD EMVPSASHDS YPVYPFTSSE HYAFHELQQD  300
QNSEQVNVIH QENHIEETVP FAQYHNDDVT SYSEEGATNF QEYNVDCYRG ADFSSTLADL  360
LNDIVTQPQL PIRIDECGYD YQLAQQMGSS SMVLNEGNID AAAFVSDQWS TCCEEQVQNL  420
EEAVRITFTE PTAPLFINND ECFPMEGLFD TDDFIAADLS WASDLFD*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016576230.1	0.0	PREDICTED: NAC domain-containing protein 101-like
TrEMBL	A0A1U8GYQ5	0.0	A0A1U8GYQ5_CAPAN; NAC domain-containing protein 101-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10426	6	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	6e-17	NAC domain containing protein 2