PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA06g21590 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 638aa MW: 70105.1 Da PI: 4.5597 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.9 | 1.2e-50 | 18 | 146 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp G+rF+Ptdeel+++yL+ k++g + ++ vi+evdi+k+ePwdLp + v+++++ew++F++ d+ky++g+r nrat++gyWkatgkd+++ ++kg CA06g21590 18 LPIGYRFRPTDEELINHYLCLKINGCEEKV-GVIREVDICKFEPWDLPdlSLVESNDNEWFYFCPIDRKYQNGQRLNRATERGYWKATGKDRTIATRKG 115 699************************999.99**************96447888999***************************************** PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLv+y grapkg++t+Wv+heyr+ CA06g21590 116 AKIGMKKTLVYYIGRAPKGKRTNWVVHEYRA 146 *****************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.37E-58 | 13 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.733 | 18 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.1E-24 | 19 | 145 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence Send to blast |
MAVLHEGNQL AVPPLNTLPI GYRFRPTDEE LINHYLCLKI NGCEEKVGVI REVDICKFEP 60 WDLPDLSLVE SNDNEWFYFC PIDRKYQNGQ RLNRATERGY WKATGKDRTI ATRKGAKIGM 120 KKTLVYYIGR APKGKRTNWV VHEYRATDKS LDGSHPGQGA FVLCRLFKKN ELKQDENVES 180 SHLDEVELVS SPAVGKSPID DELSEAVAPS PIMESDSSKS NPQKTSGGKT HDARLPIDSR 240 GNSCTAGDTE DPMLDITSVA PDPELEELLD IFFEHSPEPL DWNFFSPLHS PPLHSQLQVD 300 FGSSDLHGPV TNEISCDQKD AQCQNGLNAL NTNEFFNSIL VSSDEISYED PGLELRSDLF 360 ASNNINIITR EPVKDSGTSS QSKSEVTQEP VRTDLFEPEL LLGNSGETAV MREVNSVAPA 420 VEQAFATPYV CNDHSTGNLN VLKNGHPGEV FLSAGSGGMQ VHSSLNLDES NSYSNVGTDS 480 GFGIIRRTRQ MQNQPDDGQL GSGTQGSTGR RIRYQLKLQA GRIECRMPTD SDQGGANHEG 540 LLTAYESEKI STEDSSTAPA ISGDETQDTV SKEFKGDGLM AEDLNGKVKD TDDFPICEDS 600 KIGAMCLFSL NFYISKVLMV VSVLIVFLGV LGCFRLR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-46 | 17 | 174 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-46 | 17 | 174 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-46 | 17 | 174 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-46 | 17 | 174 | 16 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
3swm_B | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
3swm_C | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
3swm_D | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
3swp_A | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
3swp_B | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
3swp_C | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
3swp_D | 2e-46 | 17 | 174 | 19 | 173 | NAC domain-containing protein 19 |
4dul_A | 1e-46 | 17 | 174 | 16 | 170 | NAC domain-containing protein 19 |
4dul_B | 1e-46 | 17 | 174 | 16 | 170 | NAC domain-containing protein 19 |
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Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT013521 | 0.0 | BT013521.1 Lycopersicon esculentum clone 132239F, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016578099.1 | 0.0 | PREDICTED: NAC domain-containing protein 91 | ||||
Refseq | XP_016578100.1 | 0.0 | PREDICTED: NAC domain-containing protein 91 | ||||
TrEMBL | A0A2G2ZD20 | 0.0 | A0A2G2ZD20_CAPAN; Protein NTM1-like 9 | ||||
STRING | PGSC0003DMT400069511 | 0.0 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3363 | 24 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 7e-83 | NAC domain containing protein 62 |