PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA06g21590
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 638aa    MW: 70105.1 Da    PI: 4.5597
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA06g21590genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.91.2e-50181461128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lp G+rF+Ptdeel+++yL+ k++g + ++  vi+evdi+k+ePwdLp  + v+++++ew++F++ d+ky++g+r nrat++gyWkatgkd+++ ++kg
  CA06g21590  18 LPIGYRFRPTDEELINHYLCLKINGCEEKV-GVIREVDICKFEPWDLPdlSLVESNDNEWFYFCPIDRKYQNGQRLNRATERGYWKATGKDRTIATRKG 115
                 699************************999.99**************96447888999***************************************** PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g+kktLv+y grapkg++t+Wv+heyr+
  CA06g21590 116 AKIGMKKTLVYYIGRAPKGKRTNWVVHEYRA 146
                 *****************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.37E-5813169IPR003441NAC domain
PROSITE profilePS5100553.73318169IPR003441NAC domain
PfamPF023656.1E-2419145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    Send to blast
MAVLHEGNQL AVPPLNTLPI GYRFRPTDEE LINHYLCLKI NGCEEKVGVI REVDICKFEP  60
WDLPDLSLVE SNDNEWFYFC PIDRKYQNGQ RLNRATERGY WKATGKDRTI ATRKGAKIGM  120
KKTLVYYIGR APKGKRTNWV VHEYRATDKS LDGSHPGQGA FVLCRLFKKN ELKQDENVES  180
SHLDEVELVS SPAVGKSPID DELSEAVAPS PIMESDSSKS NPQKTSGGKT HDARLPIDSR  240
GNSCTAGDTE DPMLDITSVA PDPELEELLD IFFEHSPEPL DWNFFSPLHS PPLHSQLQVD  300
FGSSDLHGPV TNEISCDQKD AQCQNGLNAL NTNEFFNSIL VSSDEISYED PGLELRSDLF  360
ASNNINIITR EPVKDSGTSS QSKSEVTQEP VRTDLFEPEL LLGNSGETAV MREVNSVAPA  420
VEQAFATPYV CNDHSTGNLN VLKNGHPGEV FLSAGSGGMQ VHSSLNLDES NSYSNVGTDS  480
GFGIIRRTRQ MQNQPDDGQL GSGTQGSTGR RIRYQLKLQA GRIECRMPTD SDQGGANHEG  540
LLTAYESEKI STEDSSTAPA ISGDETQDTV SKEFKGDGLM AEDLNGKVKD TDDFPICEDS  600
KIGAMCLFSL NFYISKVLMV VSVLIVFLGV LGCFRLR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-461717416170NO APICAL MERISTEM PROTEIN
1ut4_B1e-461717416170NO APICAL MERISTEM PROTEIN
1ut7_A1e-461717416170NO APICAL MERISTEM PROTEIN
1ut7_B1e-461717416170NO APICAL MERISTEM PROTEIN
3swm_A2e-461717419173NAC domain-containing protein 19
3swm_B2e-461717419173NAC domain-containing protein 19
3swm_C2e-461717419173NAC domain-containing protein 19
3swm_D2e-461717419173NAC domain-containing protein 19
3swp_A2e-461717419173NAC domain-containing protein 19
3swp_B2e-461717419173NAC domain-containing protein 19
3swp_C2e-461717419173NAC domain-containing protein 19
3swp_D2e-461717419173NAC domain-containing protein 19
4dul_A1e-461717416170NAC domain-containing protein 19
4dul_B1e-461717416170NAC domain-containing protein 19
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0135210.0BT013521.1 Lycopersicon esculentum clone 132239F, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016578099.10.0PREDICTED: NAC domain-containing protein 91
RefseqXP_016578100.10.0PREDICTED: NAC domain-containing protein 91
TrEMBLA0A2G2ZD200.0A0A2G2ZD20_CAPAN; Protein NTM1-like 9
STRINGPGSC0003DMT4000695110.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33632448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.17e-83NAC domain containing protein 62