PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA06g17290
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 380aa    MW: 42935.6 Da    PI: 5.0843
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA06g17290genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM115.45.6e-36181492128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkge 98 
                 p GfrF Ptd el+++yL++kv+g+++    +i+evd+y+++P +L+  +++ee+ +yfF++r +k+++g+r+ r t+  +gyWk t k ++v++ k+ 
  CA06g17290  18 PSGFRFAPTDAELLQYYLRRKVNGESIWP-GIIHEVDVYECDPYHLQ-GISTEEEFTYFFTSRGRKHPNGSRTDRNTRdgKGYWKMTSKLTNVYADKND 114
                 89************************888.89**************8.677777788******************9987789************96433 PP

         NAM  99 l...vglkktLvfykgrapkge...ktdWvmheyrl 128
                      g k+tLv++  +apkg+   kt+W+mhe++l
  CA06g17290 115 IssyLGKKNTLVYF-VKAPKGKkdpKTNWIMHEFEL 149
                 35669*********.55555554449********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3915179IPR003441NAC domain
PROSITE profilePS5100541.97617180IPR003441NAC domain
PfamPF023651.7E-2018149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MSGEQEVDYD DQWKQDIPSG FRFAPTDAEL LQYYLRRKVN GESIWPGIIH EVDVYECDPY  60
HLQGISTEEE FTYFFTSRGR KHPNGSRTDR NTRDGKGYWK MTSKLTNVYA DKNDISSYLG  120
KKNTLVYFVK APKGKKDPKT NWIMHEFELA QKKVDSPSTS SCPSQEKPFN DYVVCRVYNR  180
QVKDKRETDE EKDLIDSLIG SKPVMTDHNN GEAAQVLPST KRKFEPKNET ITCDHPHAIA  240
MGMNSNYFYA SHELQAATML SNTMTSNNFD DTLKAITSSS SQDIVAPGEG VLGVEGISDQ  300
VRAIVYQEYM CQQSPHIAEK QNSGLVDHVE IGANDAQEGP HNVTTRRVDE IDYDNISLGL  360
ANNMGPVTMG DLWERYFGS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-2931815166NO APICAL MERISTEM PROTEIN
1ut4_B7e-2931815166NO APICAL MERISTEM PROTEIN
1ut7_A7e-2931815166NO APICAL MERISTEM PROTEIN
1ut7_B7e-2931815166NO APICAL MERISTEM PROTEIN
3swm_A7e-2931818169NAC domain-containing protein 19
3swm_B7e-2931818169NAC domain-containing protein 19
3swm_C7e-2931818169NAC domain-containing protein 19
3swm_D7e-2931818169NAC domain-containing protein 19
3swp_A7e-2931818169NAC domain-containing protein 19
3swp_B7e-2931818169NAC domain-containing protein 19
3swp_C7e-2931818169NAC domain-containing protein 19
3swp_D7e-2931818169NAC domain-containing protein 19
4dul_A7e-2931815166NAC domain-containing protein 19
4dul_B7e-2931815166NAC domain-containing protein 19
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016576349.10.0PREDICTED: NAC domain-containing protein 83-like
TrEMBLA0A1U8H7E10.0A0A1U8H7E1_CAPAN; Uncharacterized protein
TrEMBLA0A2G2ZBV10.0A0A2G2ZBV1_CAPAN; NAC domain-containing protein 83-like
STRINGXP_009774531.19e-65(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1918223
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-35NAC domain containing protein 57