PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA06g15350
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 535aa    MW: 60786.9 Da    PI: 4.3557
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA06g15350genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.42.5e-1841542127
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka..eekew..yfFskrdkkyatgkrknra............. 77 
                   G+rFhPtd+el+  +L + ++gk+l  +  i+e d+yk ePw   +         +  +++++  yf ++ +k++ ++k+k+ a             
  CA06g15350   4 EEGYRFHPTDSELL-TFLVRFIAGKNLYDDGYITEHDVYKQEPWVTYRygchcgG--EddGDTSIyrYFITPMHKNKIKKKNKSLAgdakkdrfcrivg 99 
                 68************.99*********999889************99644665432..122444443477777666655444333336777777778777 PP

         NAM  78 tksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyr 127
                  k g+Wk++ k k+v+ +      k+ ++g +ktL +   +++ +   +W+m+ey 
  CA06g15350 100 KKLGTWKQQDKGKNVIMSsfsnqsKSFVIGRRKTLCYE-TSRSCPDDGKWLMKEYV 154
                 779********99998877876544445********97.5666779*********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-192179IPR003441NAC domain
PROSITE profilePS5100522.1533179IPR003441NAC domain
PfamPF023655.2E-135154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    Send to blast
MELEEGYRFH PTDSELLTFL VRFIAGKNLY DDGYITEHDV YKQEPWVTYR YGCHCGGEDD  60
GDTSIYRYFI TPMHKNKIKK KNKSLAGDAK KDRFCRIVGK KLGTWKQQDK GKNVIMSSFS  120
NQSKSFVIGR RKTLCYETSR SCPDDGKWLM KEYVFSDTIL NRFTDSKFRD YVICAIKRKS  180
PKKSSNGTRC SNVTTTMDTV LVSFVEPSMD QEYNATTPLQ VESMVESDEP EEQIQEAAGL  240
ENDAVLALTT TSQIQEHNDW EIIPILDQGF EMIRPINAVE NPMVDFDEFE GEENGFLGIQ  300
EFENTIPESS LPKELVLLDK DQPQCVNEDH TAHLELENKD KSFLELLSGG ADYSIRNNHE  360
RIQEVPGEEN GHLELYTFSQ IQEPVAPDFK NANSEVNMPD IFDTLDEYMV VTVESNEPRM  420
QTREAAGEVN GLLGLNALFP QEPAVPENNV PEMFDMGETL LEKNQTQHQP APQEESETLC  480
ETGQSSFVVS DLGKAMLDHT TMEERLAALR ANQSSLMSDQ QSWLSKAHLQ DMLL*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016554312.10.0PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A2G2ZBA40.0A0A2G2ZBA4_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000905961e-166(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1427357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.46e-11NAC domain containing protein 82