PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA06g14960 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 342aa MW: 38537.1 Da PI: 4.8151 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71 | 3.2e-22 | 16 | 145 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeek..ew.yfFskrdkkyatgkrknratk..sgyWkatgkdkevlsk 95 +GfrF+P deel+ yL k + +k++e+ + i+ +d+y +P d+ ++ + + ++ y F++ kk++ gk+ +r++ g+Wk k kev+sk CA06g14960 16 MGFRFRPIDEELI-SYLLKFMCSKPIEC-DNIRMLDLYGNkKPCDIFDDLSPDGEftDVnYLFTQLTKKSTGGKNIKRTVLggGGTWKGLDKGKEVMSK 112 7************.99************.88******96549****74443333333445**********9999999964434899************* PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 kg+++glk+++ f + ++++ ++ W m+ey+l CA06g14960 113 KGSVIGLKRSFHFIDSEKSNHQRVVWNMKEYSL 145 *******************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.15E-24 | 11 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 26.276 | 14 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-12 | 16 | 145 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence Send to blast |
MNCSSSTSGG SYFDSMGFRF RPIDEELISY LLKFMCSKPI ECDNIRMLDL YGNKKPCDIF 60 DDLSPDGEFT DVNYLFTQLT KKSTGGKNIK RTVLGGGGTW KGLDKGKEVM SKKGSVIGLK 120 RSFHFIDSEK SNHQRVVWNM KEYSLSDSIV KALRRRNQIR HEGFVLCRIK KKVVVRSNDP 180 EQVIYNCQDE EIGGNNIRST NVVADQEQIM LGLGYVGVDD QNHGIGNPEE GFCDGVNVHG 240 DDQMMNGFHD SVYFQGNQMM NVFCATCDYD KEEIIGSSSH HQEQNYHIGS SCVTTSCNEF 300 ELLEVDEQEY ERAKSNVALL EEKMSELSSI VLQGNDDDYN Q* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016556279.1 | 0.0 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1U8FIX9 | 0.0 | A0A1U8FIX9_CAPAN; Uncharacterized protein | ||||
TrEMBL | A0A2G2ZB32 | 0.0 | A0A2G2ZB32_CAPAN; NAC domain-containing protein 78-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3381 | 10 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-15 | NAC domain containing protein 2 |