PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA06g07980 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bZIP | ||||||||
Protein Properties | Length: 245aa MW: 26677.9 Da PI: 6.0474 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.2 | 2.2e-10 | 154 | 202 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ CA06g07980 154 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLTLLQ 202 9*****************************************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-15 | 150 | 214 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.875 | 152 | 215 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.6E-9 | 154 | 209 | No hit | No description |
SuperFamily | SSF57959 | 3.52E-11 | 154 | 205 | No hit | No description |
Pfam | PF00170 | 2.8E-9 | 154 | 202 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.91E-23 | 155 | 204 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MSDNPPRKFG HRRAHSEILT LPDDISFDSD LGVVGLDGPS LSDETEEDIF SMYLDMDKLN 60 SSSLSSDFQV GESSSAAAAS GSSQTQGMTS GTNKVAPTVS EKPRVRHQHS QSMDGSTTIK 120 PEMLMSGVEE PSSAETKKAT SAAKLAELAL IDPKRAKRIW ANRQSAARSK ERKMRYIAEL 180 ERKVQTLQTE ATTLSAQLTL LQRDTSGLTA ENSELKLRLQ TMEQQVHLQD GKNLSMTSLV 240 TFCP* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT013485 | 0.0 | BT013485.1 Lycopersicon esculentum clone 132168R, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016575403.1 | 1e-165 | PREDICTED: probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-111 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A1U8H2V6 | 1e-164 | A0A1U8H2V6_CAPAN; probable transcription factor PosF21 | ||||
TrEMBL | A0A2G3C6D0 | 1e-164 | A0A2G3C6D0_CAPCH; Putative transcription factor PosF21 | ||||
STRING | Solyc06g053350.2.1 | 1e-143 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3965 | 21 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-85 | bZIP family protein |
Publications ? help Back to Top | |||
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