PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA05g15500
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 388aa    MW: 43163.1 Da    PI: 4.8153
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA05g15500genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44e-1992142155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++  +g+WvAeIr+p     +   r +lg+f ta eAa a+++a+++++g
  CA05g15500  92 CKYRGVRQRT-WGKWVAEIREP-----HrgSRLWLGTFATAIEAALAYDEAARAMYG 142
                 79*****999.**********6.....337************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.44E-3092151No hitNo description
PfamPF008471.8E-1392142IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-2093151IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-3093151IPR001471AP2/ERF domain
SMARTSM003801.1E-3493156IPR001471AP2/ERF domain
PROSITE profilePS5103220.98293150IPR001471AP2/ERF domain
PRINTSPR003671.8E-994105IPR001471AP2/ERF domain
PRINTSPR003671.8E-9116132IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MCYYLFDRNR DMAILDQAPN MMLPLDYTRK RKSRSRKDAP KNVAETLARW KEVNEKQDSC  60
DDDGRKPVRK VPAKGSKKGC MKGKGGPENA RCKYRGVRQR TWGKWVAEIR EPHRGSRLWL  120
GTFATAIEAA LAYDEAARAM YGPCARLNLP DYNSSKESSK DESSLPTVSH SGSNTASSFS  180
EVCPADGMKG RASVPQIIHE DGESEIKVDG TRTGSDECGT PLSTLREVVK DETKGVLNTK  240
VKEEPIAFEY DPVLSGQGSL DSFSWNDDMF DVDELLSMID SAPLDASAPN QDVGVPPQHK  300
HYAYDPAYQF QTNQLSDPSC QLKNADYQFS NPSYQMENAV GNTLEGLQQV KQQAPLTDDF  360
DFDFLKPGRE EDFNFCLDDL GLLDFGV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1694150360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732TRKRKS
23037RKSRSRKD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016573418.10.0PREDICTED: dehydration-responsive element-binding protein 2A-like
RefseqXP_016573419.10.0PREDICTED: dehydration-responsive element-binding protein 2A-like
TrEMBLA0A1U8GX890.0A0A1U8GX89_CAPAN; Dehydration-responsive element-binding protein 2A
TrEMBLA0A1U8GZ430.0A0A1U8GZ43_CAPAN; dehydration-responsive element-binding protein 2A-like
STRINGPGSC0003DMT4000697331e-179(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.14e-38DRE-binding protein 2A