PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA05g10030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Trihelix | ||||||||
Protein Properties | Length: 201aa MW: 22060.5 Da PI: 4.791 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 65.6 | 1.1e-20 | 23 | 101 | 17 | 86 |
trihelix 17 meerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ ++e++s + + ++l+ CA05g10030 23 AENRIRRGRtgslefgsaQVEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDFKKIKEWESQIKEETESFWLMRNDLR 101 55556655334444444599********************************************999999999888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 7.8E-10 | 39 | 96 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050777 | Biological Process | negative regulation of immune response | ||||
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MKLERLNLTP SIVNADSDGK KVAENRIRRG RTGSLEFGSA QVEPKWASVS SYCKKHGVNR 60 GPVQCRKRWS NLAGDFKKIK EWESQIKEET ESFWLMRNDL RREKKLPGFF DREVYDILDR 120 GTGSGNGDEE EGLVLALGSS GVAEESEVLF DSGKSAAAGD DGLFSDFEPL QDEVGATSHE 180 DFPPINQLPI PAPTPISGTT * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00288 | DAP | Transfer from AT2G33550 | Download |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT014241 | 9e-95 | BT014241.1 Lycopersicon esculentum clone 133441F, mRNA sequence. | |||
GenBank | HG975516 | 9e-95 | HG975516.1 Solanum lycopersicum chromosome ch04, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016572699.1 | 1e-133 | PREDICTED: trihelix transcription factor ASR3 isoform X1 | ||||
Refseq | XP_016572700.1 | 1e-133 | PREDICTED: trihelix transcription factor ASR3 isoform X2 | ||||
Swissprot | Q8VZ20 | 3e-61 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A2G2ZHW9 | 1e-142 | A0A2G2ZHW9_CAPAN; Uncharacterized protein | ||||
STRING | Solyc04g045430.2.1 | 1e-89 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1786 | 24 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-63 | Trihelix family protein |
Publications ? help Back to Top | |||
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