PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA05g08190

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 442aa MW: 48368.5 Da PI: 6.8361

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA05g08190	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	5e-39	78	138	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPryfCk+C+ryWt+GG++rnvPvG+grrknk+ss CA05g08190 78 PDKILPCPRCNSMETKFCYYNNYNVNQPRYFCKKCQRYWTAGGTMRNVPVGSGRRKNKSSS 138 7899******************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-30	75	135	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.3E-32	80	136	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.416	82	136	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	84	120	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence Send to blast
DLLLSNVQIT SEGELTQSKR DDFTNSTADE SVEPEISSGI SDDPKAQDAY KITLSPKSTE 60 KDDPNEASGT QDKVLKKPDK ILPCPRCNSM ETKFCYYNNY NVNQPRYFCK KCQRYWTAGG 120 TMRNVPVGSG RRKNKSSSTS SYRHIMVSDA LQAARFEAAN GMNLPSYRTN GTVLAFGSDK 180 PLCDSMASIL NIAEKSHNSI QNGFNGSEQR MIASCGGKEI GNDRSSEACS TTSNSTEKGN 240 DSTARDLAWK NFQAFPPQVH HFPGPPWPYT CNAAPWTSAV PPPTLAPSGF PVSFYPPPPY 300 WSCTMASPWN VPWVSPPPSS ASCSVHGNNP NSPTLGKHSR DESSFNPSNM AKEDTLQDKD 360 GERCVLIPKT LRIDDLDEAA KSSMWSTLGI KNDKNDSANG TRLFKAFNTK VDERNNESDT 420 NLVLQANPAA LSRSHNFQES T*

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence Send to blast

DLLLSNVQIT SEGELTQSKR DDFTNSTADE SVEPEISSGI SDDPKAQDAY KITLSPKSTE  60
KDDPNEASGT QDKVLKKPDK ILPCPRCNSM ETKFCYYNNY NVNQPRYFCK KCQRYWTAGG  120
TMRNVPVGSG RRKNKSSSTS SYRHIMVSDA LQAARFEAAN GMNLPSYRTN GTVLAFGSDK  180
PLCDSMASIL NIAEKSHNSI QNGFNGSEQR MIASCGGKEI GNDRSSEACS TTSNSTEKGN  240
DSTARDLAWK NFQAFPPQVH HFPGPPWPYT CNAAPWTSAV PPPTLAPSGF PVSFYPPPPY  300
WSCTMASPWN VPWVSPPPSS ASCSVHGNNP NSPTLGKHSR DESSFNPSNM AKEDTLQDKD  360
GERCVLIPKT LRIDDLDEAA KSSMWSTLGI KNDKNDSANG TRLFKAFNTK VDERNNESDT  420
NLVLQANPAA LSRSHNFQES T*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016572747.1	0.0	PREDICTED: cyclic dof factor 3-like
TrEMBL	A0A1U8GNC2	0.0	A0A1U8GNC2_CAPAN; Uncharacterized protein
TrEMBL	A0A2G2ZHM7	0.0	A0A2G2ZHM7_CAPAN; cyclic dof factor 3-like
STRING	XP_009788566.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA532	24	122

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	2e-95	cycling DOF factor 2