PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g21270
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 272aa    MW: 29669.6 Da    PI: 4.1449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g21270genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-184494155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr++  +g+WvAeIr+p   + r +r +lg+f+  ++Aa a++aa++kl+g
  CA04g21270 44 CKYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDNSYDAAVAYDAAALKLYG 94
                79*****999.**********8...3.35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.58E-2044104No hitNo description
PfamPF008474.7E-124494IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-2045103IPR016177DNA-binding domain
SMARTSM003801.3E-3345108IPR001471AP2/ERF domain
PROSITE profilePS5103222.02345102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2945103IPR001471AP2/ERF domain
PRINTSPR003672.9E-84657IPR001471AP2/ERF domain
PRINTSPR003672.9E-86884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MSSNFTESVD DQGRPKKQTQ AKLTQATSRK GCMRGKGGPE NASCKYKGVR QRTWGKWVAE  60
IREPNRGARL WLGTFDNSYD AAVAYDAAAL KLYGAEAKLN LPHLYNNPAQ AQEEINSNSG  120
PITINPTPAP APAPVVYNVA SPSTWSVGND PSLYFDNDYD INSFATSDDP ISIDFMGLMD  180
TTDHEEFAEK NNNQISQGLG GEMWTDEKVN NQISQGLGGE MWTDLNMLPE IDDSSIWEEA  240
EATTSFQEAV INDPGVNGCN LDGGINFPPW C*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1846102360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00240DAPTransfer from AT1G75490Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016568477.10.0PREDICTED: ethylene-responsive transcription factor 5-like
TrEMBLA0A1U8GAV50.0A0A1U8GAV5_CAPAN; Dehydration-responsive element-binding protein 2C
TrEMBLA0A2G2ZSE10.0A0A2G2ZSE1_CAPAN; ethylene-responsive transcription factor 5-like
STRINGPGSC0003DMT4000095062e-96(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31552247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-38ERF family protein