PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g20070
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 372aa    MW: 40958.1 Da    PI: 4.4187
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g20070genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.61.4e-11171188128
         NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktL 106
                 h td+e++   L +  +g++++  +vi + + y ++P++L+       +  +fF++r+++        + tk+g W+a+g   e+++ +++  g ++t+
  CA04g20070  17 HWTDDEIILS-LDQINRGSPIPD-DVIVD-NPYLYDPSNLQ-------DGAWFFVRRAEE--------KETKHGLWRAKGAACEIFA-NSAISGWRTTF 96 
                 6799999955.999999999988.77766.89999*****6.......345677777664........35789**************.999******** PP

         NAM 107 vfykgrapkgektdWvmheyrl 128
                  f + +ap  ekt W+++ey++
  CA04g20070  97 EFSQIQAPIEEKTVWMIQEYKI 118
                 ********************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.98E-178138IPR003441NAC domain
PROSITE profilePS5100517.5089140IPR003441NAC domain
PfamPF023651.1E-617118IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MHPLAPSAPP PGFMSSHWTD DEIILSLDQI NRGSPIPDDV IVDNPYLYDP SNLQDGAWFF  60
VRRAEEKETK HGLWRAKGAA CEIFANSAIS GWRTTFEFSQ IQAPIEEKTV WMIQEYKITL  120
KGQHDQTKSQ ESALCRVFSC CNETKPEQRD DLDTLDFLSL MSVFELHTSS SNGQRSIGEP  180
QVNSQAEGVV SSLIDKSGDH SDDDCILRGD YLELNDLVDA ASHSSSSESS SRPSFASDEY  240
FDSMALLRDL DDDEKKEDLN GNGSNGSYNT MTCVLQPAPL ESLVKGGEAA AEETQQAPAI  300
NKSEPPSETS TDQAAKRLKA ERMDEGPSHS CRPTTSSSSS SSSSDEPGRV ATRAEKRTKK  360
LMKYFLCFIP F*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016568633.10.0PREDICTED: uncharacterized protein LOC107867050 isoform X2
TrEMBLA0A1U8GIT40.0A0A1U8GIT4_CAPAN; uncharacterized protein LOC107867050 isoform X2
STRINGPGSC0003DMT4000715971e-154(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112072123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.24e-12NAC domain containing protein 38