PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g07260
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 153aa    MW: 16222.4 Da    PI: 5.2511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g07260genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99.2e-121663255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GV+  + +gr+  eI          k+ +lg+f ta+ Aa a++aa  k++g
  CA04g07260 16 HYRGVWKSP-SGRYTTEISI------AeKNKWLGTFNTADLAAMAYDAAIIKFHG 63
                6****9888.8******999......44**********************99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.9E-161671IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-141672IPR016177DNA-binding domain
PfamPF008473.9E-71662IPR001471AP2/ERF domain
SMARTSM003801.1E-141677IPR001471AP2/ERF domain
CDDcd000182.78E-171672No hitNo description
PROSITE profilePS5103216.2651671IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MASRTKKVNG VAEKVHYRGV WKSPSGRYTT EISIAEKNKW LGTFNTADLA AMAYDAAIIK  60
FHGVGGKTNF PIPMGDVDRS VSEVSSAESS NAVTVAELMV ESPPPMDLSL GNCGGGGADG  120
GFILESSSVI DDKEKTKRIE IDLNFPPPLK DM*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016556399.11e-109PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLA0A1U8FJA21e-107A0A1U8FJA2_CAPAN; Uncharacterized protein
TrEMBLA0A2G2ZMP61e-107A0A2G2ZMP6_CAPAN; ethylene-responsive transcription factor 4-like
STRINGSolyc10g009110.1.19e-20(Solanum lycopersicum)
STRINGPGSC0003DMT4000587517e-20(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-10erf domain protein 9