PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA04g06080 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 185aa MW: 21321.8 Da PI: 10.6581 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 38.5 | 3.3e-12 | 2 | 88 | 2 | 96 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 fq++w ++De +lL ++ +++a +gk+ ++ +++++++k++isfk + q+ +Ki++LKk k + + + +++ +++ f s+k+W CA04g06080 2 SFQKVWIDKDEKTLLEAIESYRAIHGKE--SNNNKLFNIIKGKISFKPTIVQVRNKIKSLKKIKSKTRVR------TIEDTPAEKSFFCSSQKVW 88 79************************76..5789**************************9843333333......3445778888888888888 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.2E-10 | 3 | 89 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
KSFQKVWIDK DEKTLLEAIE SYRAIHGKES NNNKLFNIIK GKISFKPTIV QVRNKIKSLK 60 KIKSKTRVRT IEDTPAEKSF FCSSQKVWSV NRMCSTTAQS SKRKKVLKDT KISNIMMTLF 120 QGNEGDEVMQ IEMSRRKVGQ LIDSGLPTKW KDLINDQANQ YLIGLNNRKS KVELFLEMME 180 TEAR* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016561821.1 | 6e-99 | PREDICTED: uncharacterized protein LOC107860858 isoform X1 | ||||
Refseq | XP_016561822.1 | 7e-99 | PREDICTED: uncharacterized protein LOC107860858 isoform X2 | ||||
TrEMBL | A0A2G2ZMG2 | 1e-131 | A0A2G2ZMG2_CAPAN; Uncharacterized protein (Fragment) |