PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA04g01650 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | G2-like | ||||||||
Protein Properties | Length: 209aa MW: 24079.9 Da PI: 8.4777 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.6 | 4.5e-31 | 84 | 137 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+++LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ CA04g01650 84 PRLRWTPQLHLSFVNAIHRLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 137 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.098 | 80 | 140 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.5E-28 | 80 | 138 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.76E-14 | 82 | 138 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 9.5E-23 | 84 | 139 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.8E-9 | 85 | 136 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MEHGNGETSE EYYMEKVMSS IDLNEEVDHD HSKIQQIDDE AIEVISVESD KITNEENNSS 60 SCGNEINIKN EMSKVRQYVR SKLPRLRWTP QLHLSFVNAI HRLGGQERAT PKLVLQMMNV 120 RGLSIAHVKS HLQMYRSKKL GEFGQVLGHG HRANQRRNYL YGNLSQRSFN PLQDFKMKNG 180 AIVLARNFND DDNINHHFQN SFARTQSR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-18 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-18 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-18 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-18 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-18 | 85 | 139 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016571767.1 | 1e-152 | PREDICTED: uncharacterized protein LOC107869877 isoform X1 | ||||
Refseq | XP_016571768.1 | 1e-154 | PREDICTED: putative Myb family transcription factor At1g14600 isoform X2 | ||||
TrEMBL | A0A1U8GSL4 | 1e-153 | A0A1U8GSL4_CAPAN; putative Myb family transcription factor At1g14600 isoform X2 | ||||
TrEMBL | A0A2G2ZL90 | 1e-151 | A0A2G2ZL90_CAPAN; Uncharacterized protein | ||||
STRING | XP_009607761.1 | 2e-87 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5516 | 23 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 4e-38 | G2-like family protein |