PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA03g32340
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 272aa    MW: 30324.8 Da    PI: 9.8402
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA03g32340genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-19123172255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+t+eeAa+a++aa++ l+g
  CA03g32340 123 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTPEEAARAYDAAARWLRG 172
                 69*******.**********32....25**********************97776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.29E-21122181No hitNo description
PROSITE profilePS5103222.062123180IPR001471AP2/ERF domain
PfamPF008472.3E-13123172IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.5E-29123180IPR001471AP2/ERF domain
SMARTSM003804.8E-32123186IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-21123181IPR016177DNA-binding domain
PRINTSPR003673.1E-10124135IPR001471AP2/ERF domain
PRINTSPR003673.1E-10146162IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MYNSHTEFLR KADLFFLPTT QKPHHLNEPT DHQFPHNYFY TDDNTANPLD SSFSSKEENE  60
KSPVLEGIAA VVGEHVLFGN NNKNSENKNH DQISEESGHA VSILKRTCPA EKCNNNSKNV  120
EKSYRGVRKR PWGRWSAEIR DRIGRCRHWL GTFDTPEEAA RAYDAAARWL RGSKARTNFQ  180
IPPVVPLPLV GATSNTSTTS SSSNSSDAEM KKKKKKKNST GASCVNNKRK CSVVTSTAHL  240
FSPTEHQVNH ELSKGVSVTV ELDLKLGFGK K*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-16122181161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A8e-161241791571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216KKKKKKK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016567537.10.0PREDICTED: ethylene-responsive transcription factor ERF084-like
SwissprotQ9M8M52e-28ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLA0A1U8G8660.0A0A1U8G866_CAPAN; Ethylene-responsive transcription factor
TrEMBLA0A2G3A2K60.0A0A2G3A2K6_CAPAN; ethylene-responsive transcription factor ERF084-like
STRINGSolyc03g117230.1.16e-84(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.14e-27ERF family protein