PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA03g31320
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 285aa    MW: 31965.6 Da    PI: 6.7085
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA03g31320genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-1981130255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a++ ++g
  CA03g31320  81 KYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALTFKG 130
                 8********.**********94....45**********************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.1E-3280139IPR001471AP2/ERF domain
PfamPF008471.3E-1381130IPR001471AP2/ERF domain
PROSITE profilePS5103224.77781138IPR001471AP2/ERF domain
SMARTSM003804.0E-3781144IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2181139IPR016177DNA-binding domain
CDDcd000182.42E-2081139No hitNo description
PRINTSPR003671.9E-118293IPR001471AP2/ERF domain
PRINTSPR003671.9E-11104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MERRSKEDNH NSSNNFPVYS SARSHQDMSA MVSVLSQVIG NTSSASADSS IDVNPLTLIP  60
QLQNHSQSSI QDNQGNSGRR KYRGVRQRPW GKWAAEIRDP KKAARVWLGT FETAEAAALA  120
YDEAALTFKG NKAKLNFPER VQGKFQFLTD TATTQNHNII VPHQQVQFPA ATSSNNHLSP  180
YNFQSYYPDV HQYAELLRSD HNTTDLNFDA SRSFNQYTSS SSGLSFDTSQ SSASNIHEEQ  240
YHNHQQEEEE GGNFMKFTTS RYGNSSSTCG PKHESNWEEF EHGK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2580141163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2498151e-111DQ249815.1 Capsicum annuum pDREB mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016563056.10.0PREDICTED: ethylene-responsive transcription factor ERF113
TrEMBLA0A1U8FV940.0A0A1U8FV94_CAPAN; Ethylene-responsive transcription factor
TrEMBLA0A2G3A2W90.0A0A2G3A2W9_CAPAN; ethylene-responsive transcription factor ERF113
STRINGXP_009587768.12e-82(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.12e-38ERF family protein